RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CELF1Q92879 486 aaKnown RBP15.54■□□□□ 0.08
TRAF1-201ENST00000373887 IWS1Q96ST2 819 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 LSG1Q9H089 658 aaKnown RBP15.54■□□□□ 0.08
TRAF1-201ENST00000373887 IRAK4Q9NWZ3 460 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 LRRD1A4D1F6 860 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 CYP21A2P08686 494 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 CDC25AP30304 524 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 CCT5P48643 541 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 RINT1Q6NUQ1 792 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 RPAINQ86UA6 219 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 RETREG2Q8NC44 543 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 CERKQ8TCT0 537 aa15.54■□□□□ 0.08
TRAF1-201ENST00000373887 RPN1P04843 607 aaKnown RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ANKRD20A4Q4UJ75 823 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ANKRD20A8PQ5CZ79 823 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ANKRD20A2Q5SQ80 823 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ANKRD20A1Q5TYW2 823 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 CLIC2O15247 247 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 SRGAP2CP0DJJ0 459 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 FAM83BQ5T0W9 1011 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 AP1ARQ63HQ0 302 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 KIAA1841Q6NSI8 718 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 SLC7A3Q8WY07 619 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 TYW1Q9NV66 732 aaKnown RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PPP2R2CQ9Y2T4 447 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PREX2Q70Z35 1606 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PFDN6O15212 129 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 SLC8A1P32418 973 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 E2F5Q15329 346 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ZKSCAN8Q15776 578 aaPredicted RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 KMT5AQ9NQR1 393 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 HESX1Q9UBX0 185 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 FNDC3AQ9Y2H6 1198 aaKnown RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PRDX5P30044 214 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PDE1BQ01064 536 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PRPSAP1Q14558 356 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 PTPN21Q16825 1174 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 DHX36Q9H2U1 1008 aaKnown RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 IPO11Q9UI26 975 aaKnown RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ORC6Q9Y5N6 252 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 SNX1Q13596 522 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
TRAF1-201ENST00000373887 RAVER2Q9HCJ3 691 aaKnown RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
TRAF1-201ENST00000373887 INHBAP08476 426 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 GUCY2DQ02846 1103 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 TMED1Q13445 227 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 NARFQ9UHQ1 456 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 A6NJR5 290 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 NDUFA8P51970 172 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 PDZD4Q76G19 769 aaPredicted RBP15.52■□□□□ 0.08
TRAF1-201ENST00000373887 LUC7L3O95232 432 aaKnown RBP15.52■□□□□ 0.08
TRAF1-201ENST00000373887 OR8K1Q8NGG5 319 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 CCDC138Q96M89 665 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 CPVLQ9H3G5 476 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 PDE11AQ9HCR9 933 aa15.52■□□□□ 0.08
TRAF1-201ENST00000373887 SCHIP1Q9P0W5 487 aaPredicted RBP15.52■□□□□ 0.08
TRAF1-201ENST00000373887 LARSQ9P2J5 1176 aaKnown RBP15.52■□□□□ 0.08
TRAF1-201ENST00000373887 MCAMP43121 646 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 GPSM2P81274 684 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 IQCB1Q15051 598 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 PIP4K2CQ8TBX8 421 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 G3BP2Q9UN86 482 aaKnown RBP15.52■□□□□ 0.07
TRAF1-201ENST00000373887 DNAJC8O75937 253 aaPredicted RBP15.52■□□□□ 0.07
TRAF1-201ENST00000373887 PKP1Q13835 747 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 ADALQ6DHV7 355 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 SMYD4Q8IYR2 804 aaPredicted RBP15.52■□□□□ 0.07
TRAF1-201ENST00000373887 CDKL2Q92772 493 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 ATP6V0A1Q93050 837 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 ZBED2Q9BTP6 218 aa15.52■□□□□ 0.07
TRAF1-201ENST00000373887 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.07
TRAF1-201ENST00000373887 LMNB1P20700 586 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 STX1BP61266 288 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 APOA5Q6Q788 366 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 RAB44Q7Z6P3 723 aaPredicted RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 CDC26Q8NHZ8 85 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 KCNG1Q9UIX4 513 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 PCDHB4Q9Y5E5 795 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 FOSP01100 380 aaPredicted RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 EEF1B2P24534 225 aaKnown RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 NLRP4Q96MN2 994 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 INTUQ9ULD6 942 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 SUFUQ9UMX1 484 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 SCAF8Q9UPN6 1271 aaKnown RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 HNRNPCL2B2RXH8 293 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 HNRNPCL1O60812 293 aaKnown RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 IFT88Q13099 833 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 ZSWIM5Q9P217 1185 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 PCDHA7Q9UN72 937 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 ABCC3O15438 1527 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 MCTP2Q6DN12 878 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 ANKRD13CQ8N6S4 541 aa15.51■□□□□ 0.07
TRAF1-201ENST00000373887 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
TRAF1-201ENST00000373887 RPGRIP1Q96KN7 1286 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms