RNA–Protein interactions for RNA: ENST00000373487.8

PBX3-203, Transcript of PBX homeobox 3, humanhuman

TSL 5 BASIC

Gene PBX3, Length 2,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-203ENST00000373487 NFRKBQ6P4R8 1299 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 PROM2Q8N271 834 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 TRIM58Q8NG06 486 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
PBX3-203ENST00000373487 SNX12Q9UMY4 172 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 TUBBP07437 444 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 MAGEA1P43355 309 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 TDRD12Q587J7 1177 aaKnown RBP16.73■□□□□ 0.27
PBX3-203ENST00000373487 SLFN13Q68D06 897 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 CREG2Q8IUH2 290 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 EHD2Q9NZN4 543 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 JRKLQ9Y4A0 524 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 PCDHA2Q9Y5H9 948 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 BUB1O43683 1085 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 NOL4O94818 638 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 SEPT2Q15019 361 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
PBX3-203ENST00000373487 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 LSM14BQ9BX40 385 aaKnown RBP16.73■□□□□ 0.27
PBX3-203ENST00000373487 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
PBX3-203ENST00000373487 QSER1Q2KHR3 1735 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 KDM3AQ9Y4C1 1321 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 MEIS1O00470 390 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 LCA5LO95447 670 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 CYP11B2P19099 503 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 MATR3P43243 847 aaKnown RBP eCLIP16.72■□□□□ 0.27
PBX3-203ENST00000373487 USH1GQ495M9 461 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
PBX3-203ENST00000373487 PRR16Q569H4 304 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 HYIQ5T013 277 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 HGSNATQ68CP4 663 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 KCNMB3Q9NPA1 279 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 GDF11O95390 407 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 KRT18P05783 430 aaKnown RBP16.72■□□□□ 0.27
PBX3-203ENST00000373487 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
PBX3-203ENST00000373487 PSMC6P62333 389 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 ENOX2Q16206 610 aaKnown RBP16.72■□□□□ 0.27
PBX3-203ENST00000373487 ASTE1Q2TB18 679 aaPredicted RBP16.72■□□□□ 0.27
PBX3-203ENST00000373487 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 CCDC65Q8IXS2 484 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 TXLNBQ8N3L3 684 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 HDAC7Q8WUI4 952 aa16.72■□□□□ 0.27
PBX3-203ENST00000373487 GREB1LQ9C091 1923 aaPredicted RBP16.72■□□□□ 0.27
PBX3-203ENST00000373487 MEIS2O14770 477 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 TLR2O60603 784 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 CASP5P51878 434 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 ARID5AQ03989 594 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 SIAH1Q8IUQ4 282 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 EXOC4Q96A65 974 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 RPGRIP1Q96KN7 1286 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 POLD4Q9HCU8 107 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 NPR1P16066 1061 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 FAM83BQ5T0W9 1011 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 EMILIN3Q9NT22 766 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
PBX3-203ENST00000373487 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
PBX3-203ENST00000373487 HSP90B2PQ58FF3 399 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 OSBPL9Q96SU4 736 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 EHD4Q9H223 541 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.7■□□□□ 0.26
PBX3-203ENST00000373487 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
PBX3-203ENST00000373487 NAP1L1P55209 391 aaKnown RBP16.7■□□□□ 0.26
PBX3-203ENST00000373487 ARHGAP4P98171 946 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 CATSPER3Q86XQ3 398 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 MSL3Q8N5Y2 521 aaKnown RBP16.7■□□□□ 0.26
PBX3-203ENST00000373487 ZDHHC15Q96MV8 337 aa16.7■□□□□ 0.26
PBX3-203ENST00000373487 TRPC5Q9UL62 973 aaPredicted RBP16.7■□□□□ 0.26
PBX3-203ENST00000373487 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 IKQ13123 557 aaPredicted RBP16.69■□□□□ 0.26
PBX3-203ENST00000373487 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
PBX3-203ENST00000373487 SFMBT2Q5VUG0 894 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 TAF3Q5VWG9 929 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 RIN2Q8WYP3 895 aaPredicted RBP16.69■□□□□ 0.26
PBX3-203ENST00000373487 ZNF622Q969S3 477 aaKnown RBP eCLIP16.69■□□□□ 0.26
PBX3-203ENST00000373487 ALS2CR12Q96Q35 445 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 CALCOCO1Q9P1Z2 691 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 CEP72Q9P209 647 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 HPCAL4Q9UM19 191 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 SIPA1L1O43166 1804 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 DNA2P51530 1060 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 USP11P51784 963 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 SLC7A5Q01650 507 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 ICA1Q05084 483 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 ADAM9Q13443 819 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 COL23A1Q86Y22 540 aaPredicted RBP16.69■□□□□ 0.26
PBX3-203ENST00000373487 TRIM59Q8IWR1 403 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 TRERF1Q96PN7 1200 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 LRRC1Q9BTT6 524 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
PBX3-203ENST00000373487 BCAS3Q9H6U6 928 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 CCNI2Q6ZMN8 369 aaPredicted RBP16.69■□□□□ 0.26
PBX3-203ENST00000373487 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
PBX3-203ENST00000373487 CEP63Q96MT8 703 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms