RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 PNMA3Q9UL41 463 aa12.76□□□□□ -0.37
TSPAN1-201ENST00000372003 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 CPP00450 1065 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 GYPCP04921 128 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 CASP14P31944 242 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 SLC16A2P36021 539 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 ARHGAP25P42331 645 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 NOP2P46087 812 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 VSNL1P62760 191 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 COG2Q14746 738 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 C10orf67Q8IYJ2 551 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 PPM1EQ8WY54 764 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 PAGE5Q96GU1 130 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 ABHD10Q9NUJ1 306 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 WBP1LQ9NX94 342 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 RWDD2AQ9UIY3 292 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 FAN1Q9Y2M0 1017 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 SLC45A1Q9Y2W3 748 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 MYH6P13533 1939 aa12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
TSPAN1-201ENST00000372003 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 CA12O43570 354 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 PEX10O60683 326 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 PPFIA4O75335 1185 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 PARP1P09874 1014 aaKnown RBP12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 CORO7P57737 925 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 ZNF543Q08ER8 600 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 TROAPQ12815 778 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 TRERF1Q96PN7 1200 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 UBA5Q9GZZ9 404 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 CPVLQ9H3G5 476 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 RMND1Q9NWS8 449 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 HOXC10Q9NYD6 342 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 CPA4Q9UI42 421 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 FEM1BQ9UK73 627 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 PCDHB6Q9Y5E3 794 aa12.74□□□□□ -0.37
TSPAN1-201ENST00000372003 A6NNZ2 444 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 DSG3P32926 999 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 STAT2P52630 851 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 HERVK_113P62684 666 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 GRIN1Q05586 938 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 PTPN21Q16825 1174 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 TUBB8Q3ZCM7 444 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 SPECC1Q5M775 1068 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 STAG2Q8N3U4 1231 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 LCMT1Q9UIC8 334 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 A0A1W2PQC6 194 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 VGLL3A8MV65 326 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 TLR2O60603 784 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 DDAH1O94760 285 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 FXR1P51114 621 aaKnown RBP eCLIP12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 GYS2P54840 703 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 SNAP25P60880 206 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 ERVK-24P63145 666 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 HSP90AA4PQ58FG1 418 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 GPATCH4Q5T3I0 446 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 PAPD7Q5XG87 772 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 LRRC31Q6UY01 552 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 EFCAB13Q8IY85 973 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 PRPF38AQ8NAV1 312 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 AFAP1L1Q8TED9 768 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 ZSWIM4Q9H7M6 989 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 MAD2L2Q9UI95 211 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
TSPAN1-201ENST00000372003 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 KLRF2D3W0D1 207 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 TRIM66O15016 1216 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 N4BP3O15049 544 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 PRPF6O94906 941 aaKnown RBP12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 CALM1P0DP23 149 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 CALM2P0DP24 149 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 CALM3P0DP25 149 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 KRT83P78385 493 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 GRM4Q14833 912 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 TTC31Q49AM3 519 aaPredicted RBP12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 CMTR1Q8N1G2 835 aaKnown RBP12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 FANCBQ8NB91 859 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 PRR12Q9ULL5 1215 aa12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 CTDP1Q9Y5B0 961 aaPredicted RBP12.72□□□□□ -0.37
TSPAN1-201ENST00000372003 PALM3A6NDB9 673 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms