RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 NECAB3Q96P71 396 aaPredicted RBP16.35■□□□□ 0.21
UBL4A-201ENST00000369653 WDR11Q9BZH6 1224 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 CERS4Q9HA82 394 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 LIMCH1Q9UPQ0 1083 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
UBL4A-201ENST00000369653 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
UBL4A-201ENST00000369653 MEIS2O14770 477 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 ZEB2O60315 1214 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 ARHGEF15O94989 841 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 LARGE1O95461 756 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 STXBP2Q15833 593 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 PKN1Q16512 942 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 DUSP28Q4G0W2 176 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 USP17L6PQ6QN14 398 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 PDCD2LQ9BRP1 358 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
UBL4A-201ENST00000369653 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 SLC4A7Q9Y6M7 1214 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 FRMPD4Q14CM0 1322 aa16.34■□□□□ 0.21
UBL4A-201ENST00000369653 DOCK5Q9H7D0 1870 aa16.33■□□□□ 0.21
UBL4A-201ENST00000369653 ESYT2A0FGR8 921 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 EPOPA6NHQ4 379 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 SPDYE3A6NKU9 549 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 NR3C2P08235 984 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 COL9A1P20849 921 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 CCND2P30279 289 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 CHMP4BP1P59074 171 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 PURAQ00577 322 aaKnown RBP16.33■□□□□ 0.2
UBL4A-201ENST00000369653 TFF2Q03403 129 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 PGM5Q15124 567 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 UBE2SQ16763 222 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 FAM47CQ5HY64 1035 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 KRT40Q6A162 431 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 SPRED2Q7Z698 418 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 NECAB1Q8N987 351 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.2
UBL4A-201ENST00000369653 ASB2Q96Q27 587 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 EHMT1Q9H9B1 1298 aa16.33■□□□□ 0.2
UBL4A-201ENST00000369653 ATP2A2P16615 1042 aaKnown RBP16.32■□□□□ 0.2
UBL4A-201ENST00000369653 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
UBL4A-201ENST00000369653 SCFD2Q8WU76 684 aa16.32■□□□□ 0.2
UBL4A-201ENST00000369653 C6orf50Q9HD87 102 aa16.32■□□□□ 0.2
UBL4A-201ENST00000369653 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
UBL4A-201ENST00000369653 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
UBL4A-201ENST00000369653 RBM47A0AV96 593 aaKnown RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 EIF3JO75822 258 aaKnown RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 ARIH2O95376 493 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 FOSP01100 380 aaPredicted RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 CA3P07451 260 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 GNA11P29992 359 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 MCTP2Q6DN12 878 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 BICD2Q8TD16 824 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 ATXN2LQ8WWM7 1075 aaKnown RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 WASF1Q92558 559 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 UHRF1Q96T88 793 aaPredicted RBP16.31■□□□□ 0.2
UBL4A-201ENST00000369653 ZMYND12Q9H0C1 365 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 Q9Y3F1 56 aa16.31■□□□□ 0.2
UBL4A-201ENST00000369653 STAM2O75886 525 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 XBP1P17861 261 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 MCM2P49736 904 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 MRPS5P82675 430 aaKnown RBP16.3■□□□□ 0.2
UBL4A-201ENST00000369653 VSIG10LQ86VR7 867 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 MTG1Q9BT17 334 aaPredicted RBP16.3■□□□□ 0.2
UBL4A-201ENST00000369653 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 SIP14410 1827 aa16.3■□□□□ 0.2
UBL4A-201ENST00000369653 MICAL3Q7RTP6 2002 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 MYO7AQ13402 2215 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 NKRFO15226 690 aaKnown RBP eCLIP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 KCNQ1P51787 676 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 NLRP5P59047 1200 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 PCNX4Q63HM2 1172 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 SEPT14Q6ZU15 432 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 TMCO2Q7Z6W1 182 aaPredicted RBP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 CCDC83Q8IWF9 413 aa16.29■□□□□ 0.2
UBL4A-201ENST00000369653 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 REXO1Q8N1G1 1221 aaKnown RBP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 NSUN7Q8NE18 718 aaKnown RBP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 ORC3Q9UBD5 711 aaPredicted RBP16.29■□□□□ 0.2
UBL4A-201ENST00000369653 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
UBL4A-201ENST00000369653 CPT1AP50416 773 aa16.28■□□□□ 0.2
UBL4A-201ENST00000369653 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms