RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TRIM6Q9C030 488 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 CNOT10Q9H9A5 744 aaKnown RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 POLD4Q9HCU8 107 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 BTNL10A8MVZ5 291 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 ORC4O43929 436 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 RIPK1Q13546 671 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 UAP1Q16222 522 aaPredicted RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 TXNRD1Q16881 649 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 SPRED3Q2MJR0 410 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 SPDYCQ5MJ68 293 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 RRAGAQ7L523 313 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 DAGLBQ8NCG7 672 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 CCHCR1Q8TD31 782 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 HVCN1Q96D96 273 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 PCDHA4Q9UN74 947 aa11.57□□□□□ -0.56
LYSMD1-201ENST00000368908 NUP98P52948 1817 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 MYH4Q9Y623 1939 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 PDE8AO60658 829 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 PALMO75781 387 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 AMPD3Q01432 767 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 SLMAPQ14BN4 828 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 EP400NLQ6ZTU2 488 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 RAPGEF5Q92565 580 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 SCLT1Q96NL6 688 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 BRIP1Q9BX63 1249 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 FAM207AQ9NSI2 230 aaPredicted RBP11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 CACNA1SQ13698 1873 aa11.56□□□□□ -0.56
LYSMD1-201ENST00000368908 MINDY4BA8MYZ0 360 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 M0R2N6 131 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 IRS4O14654 1257 aaPredicted RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 BUB1O43683 1085 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ATP6V1G2O95670 118 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 SERPING1P05155 500 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 DRD4P21917 467 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ERVK-9P63128 1117 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ASIC1P78348 528 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ATP2B2Q01814 1243 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 GFPT1Q06210 699 aaPredicted RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 STK4Q13043 487 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 SLC9C1Q4G0N8 1177 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 GALNT17Q6IS24 598 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 RSRC1Q96IZ7 334 aaKnown RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 PBKQ96KB5 322 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 MMRN2Q9H8L6 949 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 EBF2Q9HAK2 575 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 CEP72Q9P209 647 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 PLCG1P19174 1290 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 CTNNA1P35221 906 aaKnown RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ELF3P78545 371 aaPredicted RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ZKSCAN8Q15776 578 aaPredicted RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 C11orf91Q3C1V1 193 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 MSL1Q68DK7 614 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 CABP7Q86V35 215 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 LRRC15Q8TF66 581 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 SCFD2Q8WU76 684 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 BCCIPQ9P287 314 aaKnown RBP eCLIP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 ATP8B3O60423 1300 aa11.55□□□□□ -0.56
LYSMD1-201ENST00000368908 MAGEB6P1A0A0J9YX57 407 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 PP2D1A8MPX8 630 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 LRRC63Q05C16 580 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 HLTFQ14527 1009 aaKnown RBP eCLIP11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 PPP2R5AQ15172 486 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 STAG2Q8N3U4 1231 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 ANKRD13CQ8N6S4 541 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 KIAA0895Q8NCT3 520 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 TAF4BQ92750 862 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 CUL5Q93034 780 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 TMEM60Q9H2L4 133 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 CCDC194A0A1B0GVG4 234 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 CFAP73A6NFT4 308 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 ADAMTS3O15072 1205 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 CYP7A1P22680 504 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 PAX7P23759 505 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 KIF5BP33176 963 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 KCNQ4P56696 695 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 SIK1P57059 783 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 ITIH4Q14624 930 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 CACNA2D4Q7Z3S7 1137 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 PROM2Q8N271 834 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 ACTRT1Q8TDG2 376 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 TLCD1Q96CP7 247 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 NOD2Q9HC29 1040 aa11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 CCNL1Q9UK58 526 aaPredicted RBP11.54□□□□□ -0.56
LYSMD1-201ENST00000368908 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 CCT8L1PA6NM43 557 aa11.53□□□□□ -0.56
LYSMD1-201ENST00000368908 CCDC188H7C350 402 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms