RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 COL15A1P39059 1388 aa9.83□□□□□ -0.84
H3F3A-201ENST00000366813 TONSLQ96HA7 1378 aa9.83□□□□□ -0.84
H3F3A-201ENST00000366813 NCAPD2Q15021 1401 aa9.83□□□□□ -0.84
H3F3A-201ENST00000366813 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
H3F3A-201ENST00000366813 CYP19A1P11511 503 aaPredicted RBP9.82□□□□□ -0.84
H3F3A-201ENST00000366813 EIF6P56537 245 aaKnown RBP9.82□□□□□ -0.84
H3F3A-201ENST00000366813 CWF19L2Q2TBE0 894 aaKnown RBP9.82□□□□□ -0.84
H3F3A-201ENST00000366813 TMEM201Q5SNT2 666 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 REC114Q7Z4M0 266 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 SLITRK4Q8IW52 837 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 PPP1R13LQ8WUF5 828 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 JDP2Q8WYK2 163 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 NKD1Q969G9 470 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 SPATA32Q96LK8 384 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 HDAC9Q9UKV0 1011 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 NFIBO00712 420 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 PPM1GO15355 546 aaPredicted RBP9.82□□□□□ -0.84
H3F3A-201ENST00000366813 ROCK2O75116 1388 aaKnown RBP9.82□□□□□ -0.84
H3F3A-201ENST00000366813 EGR3Q06889 387 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 TJP1Q07157 1748 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 RGMBQ6NW40 437 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 GPR62Q9BZJ7 368 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 DCP1AQ9NPI6 582 aaPredicted RBP9.82□□□□□ -0.84
H3F3A-201ENST00000366813 KLHL3Q9UH77 587 aa9.82□□□□□ -0.84
H3F3A-201ENST00000366813 CEP290O15078 2479 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 NPHP1O15259 732 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 TSPAN15O95858 294 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 TMEM253P0C7T8 217 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 CANXP27824 592 aaKnown RBP9.81□□□□□ -0.84
H3F3A-201ENST00000366813 ERVFC1P60507 584 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 FBLN7Q53RD9 439 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 RTKN2Q8IZC4 609 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 DTWD2Q8NBA8 298 aa9.81□□□□□ -0.84
H3F3A-201ENST00000366813 ZSCAN18Q8TBC5 510 aaPredicted RBP9.81□□□□□ -0.84
H3F3A-201ENST00000366813 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
H3F3A-201ENST00000366813 ATF4P18848 351 aaPredicted RBP9.8□□□□□ -0.84
H3F3A-201ENST00000366813 FBXO46Q6PJ61 603 aaPredicted RBP9.8□□□□□ -0.84
H3F3A-201ENST00000366813 TSPYL5Q86VY4 417 aaPredicted RBP9.8□□□□□ -0.84
H3F3A-201ENST00000366813 CNBD1Q8NA66 436 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 CCDC74BQ96LY2 380 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 GMLQ99445 158 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 EPB41L4BQ9H329 900 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 BRMS1Q9HCU9 246 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 ADARB2Q9NS39 739 aaKnown RBP9.8□□□□□ -0.84
H3F3A-201ENST00000366813 GINM1Q9NU53 330 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 REV1Q9UBZ9 1251 aa9.8□□□□□ -0.84
H3F3A-201ENST00000366813 POLR3KQ9Y2Y1 108 aaPredicted RBP9.8□□□□□ -0.84
H3F3A-201ENST00000366813 SCN11AQ9UI33 1791 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 COL4A5P29400 1685 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 ST20-MTHFSA0A0A6YYL1 179 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 LRRN2O75325 713 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 MTHFSP49914 203 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 COL9A2Q14055 689 aaPredicted RBP9.79□□□□□ -0.84
H3F3A-201ENST00000366813 KRTAP19-4Q3LI73 84 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 VPS37DQ86XT2 251 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 SLFN12Q8IYM2 578 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 PHACTR4Q8IZ21 702 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 RNF141Q8WVD5 230 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 GPRC5DQ9NZD1 345 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 EFR3BQ9Y2G0 817 aa9.79□□□□□ -0.84
H3F3A-201ENST00000366813 RANBP2P49792 3224 aaKnown RBP9.78□□□□□ -0.84
H3F3A-201ENST00000366813 KIF24Q5T7B8 1368 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 CHURC1-FNTBB4DL54 471 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 TBC1D8O95759 1140 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 HPXP02790 462 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 SRFP11831 508 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 SOX9P48436 509 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 ARID5AQ03989 594 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 GAB4Q2WGN9 574 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 LCE1DQ5T752 114 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 ZNF530Q6P9A1 599 aaPredicted RBP9.78□□□□□ -0.84
H3F3A-201ENST00000366813 OXR1Q8N573 874 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 BAHD1Q8TBE0 780 aaPredicted RBP9.78□□□□□ -0.84
H3F3A-201ENST00000366813 DHX38Q92620 1227 aaKnown RBP9.78□□□□□ -0.84
H3F3A-201ENST00000366813 PGAP2Q9UHJ9 254 aa9.78□□□□□ -0.84
H3F3A-201ENST00000366813 KIAA0100Q14667 2235 aaKnown RBP9.77□□□□□ -0.85
H3F3A-201ENST00000366813 H0YGN5 161 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 HTR3BO95264 441 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 C1QTNF9P0C862 333 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 NPR1P16066 1061 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 EN2P19622 333 aaPredicted RBP9.77□□□□□ -0.85
H3F3A-201ENST00000366813 CFPP27918 469 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 GBP1P32455 592 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 TRHRP34981 398 aaPredicted RBP9.77□□□□□ -0.85
H3F3A-201ENST00000366813 ST5P78524 1137 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 CLEC16AQ2KHT3 1053 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
H3F3A-201ENST00000366813 KREMEN1Q96MU8 473 aa9.77□□□□□ -0.85
H3F3A-201ENST00000366813 BRCA2P51587 3418 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 CENPFP49454 3210 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 AKAP11Q9UKA4 1901 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 DNAJA1P31689 397 aaKnown RBP9.76□□□□□ -0.85
H3F3A-201ENST00000366813 MCM4P33991 863 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 NASPP49321 788 aaPredicted RBP9.76□□□□□ -0.85
H3F3A-201ENST00000366813 ZNF165P49910 485 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 EIF5P55010 431 aaKnown RBP9.76□□□□□ -0.85
H3F3A-201ENST00000366813 SLC39A6Q13433 755 aa9.76□□□□□ -0.85
H3F3A-201ENST00000366813 SPOCD1Q6ZMY3 1216 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms