RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 PFKFB2O60825 505 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 BAIAP3O94812 1187 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 ARIH2O95376 493 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 TCTN1Q2MV58 587 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 CCDC83Q8IWF9 413 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 HSCBQ8IWL3 235 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 CMTR1Q8N1G2 835 aaKnown RBP9.44□□□□□ -0.9
MRPL55-211ENST00000366738 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 GTF3C6Q969F1 213 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-211ENST00000366738 MTG1Q9BT17 334 aaPredicted RBP9.44□□□□□ -0.9
MRPL55-211ENST00000366738 ZBED2Q9BTP6 218 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 WDR11Q9BZH6 1224 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 LMCD1Q9NZU5 365 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 COL20A1Q9P218 1284 aa9.44□□□□□ -0.9
MRPL55-211ENST00000366738 TECTAO75443 2155 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 LINC01553A4QN01 128 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 PALM3A6NDB9 673 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-211ENST00000366738 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 CTDNEP1O95476 244 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
MRPL55-211ENST00000366738 CHMP4BP1P59074 171 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 ERVK-21P61565 698 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 GPNMBQ14956 572 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 RTN1Q16799 776 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 USH1GQ495M9 461 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 RNF207Q6ZRF8 634 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 TMTC3Q6ZXV5 915 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 TMTC2Q8N394 836 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 FANCBQ8NB91 859 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 TGS1Q96RS0 853 aaKnown RBP9.43□□□□□ -0.9
MRPL55-211ENST00000366738 SLKQ9H2G2 1235 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-211ENST00000366738 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
MRPL55-211ENST00000366738 POTEB3A0JP26 581 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 OPLAHO14841 1288 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CYTH3O43739 400 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 JAK2O60674 1132 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 GJB5O95377 273 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 PARP1P09874 1014 aaKnown RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CALM1P0DP23 149 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CALM2P0DP24 149 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CALM3P0DP25 149 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 MCM2P49736 904 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CPT1AP50416 773 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 RCAN1P53805 252 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 BFSP2Q13515 415 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 ASPRV1Q53RT3 343 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 NFRKBQ6P4R8 1299 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 POTEBQ6S5H4 581 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 SYNE3Q6ZMZ3 975 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 ADGRF4Q8IZF3 695 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CTCFLQ8NI51 663 aaPredicted RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 NEK9Q8TD19 979 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 TAAR1Q96RJ0 339 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 CTAGE1Q96RT6 745 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 C17orf80Q9BSJ5 609 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 SH2B1Q9NRF2 756 aaPredicted RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 FOXD4L1Q9NU39 408 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 ADD3Q9UEY8 706 aaKnown RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 WDR87Q6ZQQ6 2873 aa9.42□□□□□ -0.9
MRPL55-211ENST00000366738 RIF1Q5UIP0 2472 aaKnown RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 PTPRZ1P23471 2315 aaPredicted RBP9.42□□□□□ -0.9
MRPL55-211ENST00000366738 LOC102724159A0A0B4J2E5 919 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 hCG_1642624A0A1W2PR95 340 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 A6NJR5 290 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 PPP1R11O60927 126 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 ZP2Q05996 745 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 PDE4DQ08499 809 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 FUT2Q10981 343 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 CUL4AQ13619 759 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 PWP2Q15269 919 aaKnown RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 NTRK3Q16288 839 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 CDC37Q16543 378 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 QRICH1Q2TAL8 776 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 GPATCH4Q5T3I0 446 aaKnown RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 CCDC62Q6P9F0 684 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 EP400NLQ6ZTU2 488 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 RGS22Q8NE09 1264 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 NSUN7Q8NE18 718 aaKnown RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 PRSS33Q8NF86 280 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 DNERQ8NFT8 737 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 SYTL5Q8TDW5 730 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 PHKBQ93100 1093 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 MAP3K14Q99558 947 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 RAD9AQ99638 391 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 KCNH6Q9H252 994 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 JMJD4Q9H9V9 463 aa9.41□□□□□ -0.9
MRPL55-211ENST00000366738 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
MRPL55-211ENST00000366738 MYO15AQ9UKN7 3530 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 KLRF2D3W0D1 207 aa9.4□□□□□ -0.9
MRPL55-211ENST00000366738 NBNO60934 754 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms