RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 UBIAD1Q9Y5Z9 338 aa11.87□□□□□ -0.51
YBX3-203ENST00000366286 MICAL3Q7RTP6 2002 aa11.87□□□□□ -0.51
YBX3-203ENST00000366286 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 PRPF3O43395 683 aaKnown RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 KCNA2P16389 499 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 CLK2P49760 499 aaKnown RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 CCT2P78371 535 aaKnown RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 SP4Q02446 784 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 MTMR1Q13613 665 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 NTRK3Q16288 839 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 RASIP1Q5U651 963 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 TRIM50Q86XT4 487 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 TEX2Q8IWB9 1127 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 VWCEQ96DN2 955 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 CDHR1Q96JP9 859 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 SLC26A6Q9BXS9 759 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 RNF26Q9BY78 433 aaPredicted RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 GLT8D2Q9H1C3 349 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 JADE2Q9NQC1 790 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 MTMR10Q9NXD2 777 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 PKD2L1Q9P0L9 805 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 MYH9P35579 1960 aaKnown RBP11.86□□□□□ -0.51
YBX3-203ENST00000366286 LOXHD1Q8IVV2 1947 aa11.86□□□□□ -0.51
YBX3-203ENST00000366286 ESYT2A0FGR8 921 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 ADAMTS3O15072 1205 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 ATP9AO75110 1047 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 FOSP01100 380 aaPredicted RBP11.85□□□□□ -0.51
YBX3-203ENST00000366286 IFNAR1P17181 557 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 SREBF1P36956 1147 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
YBX3-203ENST00000366286 AP3B2Q13367 1082 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 BFSP2Q13515 415 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 HIC1Q14526 733 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 DEFB128Q7Z7B8 93 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 CCDC155Q8N6L0 562 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 GIMAP8Q8ND71 665 aaPredicted RBP11.85□□□□□ -0.51
YBX3-203ENST00000366286 CAGE1Q8TC20 777 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 HERVK_113Q902F9 699 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 FAM161BQ96MY7 647 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 ZMYND12Q9H0C1 365 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 PDRG1Q9NUG6 133 aa11.85□□□□□ -0.51
YBX3-203ENST00000366286 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
YBX3-203ENST00000366286 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 H3BRB1 525 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 FGBP02675 491 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 PFKMP08237 780 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 IQCF3P0C7M6 154 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 RFC2P35250 354 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 RBL2Q08999 1139 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 STK3Q13188 491 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 JAKMIP3Q5VZ66 844 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 POTEDQ86YR6 584 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 RPUSD2Q8IZ73 545 aaKnown RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 AFAP1L1Q8TED9 768 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 CCDC12Q8WUD4 166 aaPredicted RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 WNT8BQ93098 351 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 MXRA8Q9BRK3 442 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 MTIF3Q9H2K0 278 aaKnown RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 TUT1Q9H6E5 874 aaKnown RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 ZNF215Q9UL58 517 aaPredicted RBP11.84□□□□□ -0.51
YBX3-203ENST00000366286 COL6A3P12111 3177 aa11.84□□□□□ -0.51
YBX3-203ENST00000366286 C17orf102A2RUQ5 167 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 CKBP12277 381 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 DNAJB2P25686 324 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 HOXC8P31273 242 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
YBX3-203ENST00000366286 ANAPC15P60006 121 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 ARHGAP4P98171 946 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 PTK7Q13308 1070 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 TRIM71Q2Q1W2 868 aaKnown RBP11.83□□□□□ -0.52
YBX3-203ENST00000366286 LRRC8DQ7L1W4 858 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 REXO1Q8N1G1 1221 aaKnown RBP11.83□□□□□ -0.52
YBX3-203ENST00000366286 CCDC148Q8NFR7 591 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 ZNF274Q96GC6 653 aaPredicted RBP11.83□□□□□ -0.52
YBX3-203ENST00000366286 TTYH1Q9H313 450 aaPredicted RBP11.83□□□□□ -0.52
YBX3-203ENST00000366286 C6orf50Q9HD87 102 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 JPH1Q9HDC5 661 aaPredicted RBP11.83□□□□□ -0.52
YBX3-203ENST00000366286 KCNH7Q9NS40 1196 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 VPS54Q9P1Q0 977 aa11.83□□□□□ -0.52
YBX3-203ENST00000366286 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
YBX3-203ENST00000366286 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
YBX3-203ENST00000366286 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
YBX3-203ENST00000366286 CPLX1O14810 134 aa11.82□□□□□ -0.52
YBX3-203ENST00000366286 ARP10275 920 aa11.82□□□□□ -0.52
YBX3-203ENST00000366286 SELPP16109 830 aa11.82□□□□□ -0.52
YBX3-203ENST00000366286 PBX2P40425 430 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms