RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 HPDP32754 393 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 MAPK8IP2Q13387 824 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 STAG2Q8N3U4 1231 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TTC39CQ8N584 583 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF473Q8WTR7 871 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ZSCAN10Q96SZ4 725 aaPredicted RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM109Q9BVC6 243 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 MRPL47Q9HD33 250 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 CYB5D1Q6P9G0 228 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 UNC13DQ70J99 1090 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 IMPG2Q9BZV3 1241 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 SAMSN1Q9NSI8 373 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 SNUPNO95149 360 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 VSNL1P62760 191 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 POTEAQ6S8J7 498 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ANO5Q75V66 913 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ASPHQ12797 758 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 WDR44Q5JSH3 913 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 SLC40A1Q9NP59 571 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 WHRNQ9P202 907 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 HARSP12081 509 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF76P36508 570 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ARHGEF2Q92974 986 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM237Q96Q45 408 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PALLDQ8WX93 1383 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TNRQ92752 1358 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 A8MXQ7 604 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PPIP5K2O43314 1243 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 CLASP2O75122 1294 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ATG16L1Q676U5 607 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TMOD3Q9NYL9 352 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PCDHA12Q9UN75 941 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 H7C1W4 665 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 SYMPKQ92797 1274 aaKnown RBP4.46□□□□□ -1.7
SYNE2-204ENST00000358025 AP3B1O00203 1094 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 CTNNA2P26232 953 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF449Q6P9G9 518 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 PCDHA4Q9UN74 947 aa4.46□□□□□ -1.7
SYNE2-204ENST00000358025 MYBL1P10243 752 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MDM2Q00987 491 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ENPEPQ07075 957 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 SLC18A3Q16572 532 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TRMT5Q32P41 509 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MAP7D1Q3KQU3 841 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ASPRV1Q53RT3 343 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 DZIP1Q86YF9 867 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 DBNLQ9UJU6 430 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ITGA9Q13797 1035 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC144BQ3MJ40 725 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC144CPQ8IYA2 1237 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 REXO1Q8N1G1 1221 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC82Q8N4S0 544 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ERP44Q9BS26 406 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 AIPL1Q9NZN9 384 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 SERTAD1Q9UHV2 236 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 BAZ2BQ9UIF8 2168 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 RSPH10B2B2RC85 870 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 KLHL2O95198 593 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 RSPH10BP0C881 870 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MATR3P43243 847 aaKnown RBP eCLIP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 SLC18A1P54219 525 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MAGEB6Q8N7X4 407 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CNBD1Q8NA66 436 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANKZF1Q9H8Y5 726 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TXNDC16Q9P2K2 825 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PITPNM2Q9BZ72 1349 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MMEP08473 750 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PCSK2P16519 638 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 COPS2P61201 443 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC92Q53HC0 331 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 NR1H4Q96RI1 486 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 KIAA0391O15091 583 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 AHCYL1O43865 530 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANP32DO95626 131 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 KRT5P13647 590 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TMTC3Q6ZXV5 915 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 INPP5DQ92835 1189 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 OPTNQ96CV9 577 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TRIM66O15016 1216 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PDE8AO60658 829 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CAPN15O75808 1086 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ATF2P15336 505 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 XIAPP98170 497 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TAF11Q15544 211 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TMEM259Q4ZIN3 620 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 KLC3Q6P597 504 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PALB2Q86YC2 1186 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANKS1AQ92625 1134 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 C7orf25Q9BPX7 421 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 FBXL5Q9UKA1 691 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PPP1R9AQ9ULJ8 1098 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 SUGT1Q9Y2Z0 365 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 DR1Q01658 176 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANKRD20A4Q4UJ75 823 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANKRD20A8PQ5CZ79 823 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANKRD20A2Q5SQ80 823 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ANKRD20A1Q5TYW2 823 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms