RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
CAPN3-205ENST00000357568 TBC1D22AQ8WUA7 517 aa11.74□□□□□ -0.53
CAPN3-205ENST00000357568 LRRC45Q96CN5 670 aa11.74□□□□□ -0.53
CAPN3-205ENST00000357568 MLXIPQ9HAP2 919 aa11.74□□□□□ -0.53
CAPN3-205ENST00000357568 TAF1P21675 1872 aa11.74□□□□□ -0.53
CAPN3-205ENST00000357568 BTNL10A8MVZ5 291 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 PES1O00541 588 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 TRAPPC3O43617 180 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 SLC7A5Q01650 507 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 GUCY1A3Q02108 690 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 MTMR3Q13615 1198 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 DTHD1Q6ZMT9 781 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 SH2D3CQ8N5H7 860 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 SLC12A6Q9UHW9 1150 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 ODF2LQ9ULJ1 636 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 KIF3CO14782 793 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 KRT14P02533 472 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 EZRP15311 586 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CALRP27797 417 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 EIF4A3P38919 411 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 ATP1A2P50993 1020 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 NLRP5P59047 1200 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 HDLBPQ00341 1268 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 SATB1Q01826 763 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 RASGRF1Q13972 1273 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 MAN2A1Q16706 1144 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 RNF187Q5TA31 235 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 PIK3AP1Q6ZUJ8 805 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 ISCUQ9H1K1 167 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 KDM4CQ9H3R0 1056 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 TMEM59LQ9UK28 342 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 ATP6V0A2Q9Y487 856 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 COL4A1P02462 1669 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 AKR1B10O60218 316 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 PLEKHA8P1O95397 391 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 GLI1P08151 1106 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CARSP49589 748 aaKnown RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 SLC8A3P57103 927 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 ORC2Q13416 577 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 ANKRD20A8PQ5CZ79 823 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 TTC19Q6DKK2 380 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CENPPQ6IPU0 288 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CNNM4Q6P4Q7 775 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CYB5D1Q6P9G0 228 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 FMNL3Q8IVF7 1028 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 TEX11Q8IYF3 940 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 FUKQ8N0W3 1084 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 PCMTD1Q96MG8 357 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 INPP4AQ96PE3 977 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
CAPN3-205ENST00000357568 EPB41L5Q9HCM4 733 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 NFU1Q9UMS0 254 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 PCDHGC5Q9Y5F6 944 aa11.73□□□□□ -0.53
CAPN3-205ENST00000357568 GCOM1H8Y6P7 765 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-205ENST00000357568 PRDM1O75626 825 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 GSTA1P08263 222 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 MYZAPP0CAP1 466 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 MCM7P33993 719 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 AMPD3Q01432 767 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 SLMAPQ14BN4 828 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 C7orf43Q8WVR3 580 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 CENPTQ96BT3 561 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
CAPN3-205ENST00000357568 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
CAPN3-205ENST00000357568 CD248Q9HCU0 757 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 MAPK8IP1Q9UQF2 711 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 A0A1B0GUA9 196 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 PRKAB2O43741 272 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 ORC4O43929 436 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 IFT88Q13099 833 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 KRT26Q7Z3Y9 468 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 BLIDQ8IZY5 108 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 BAP1Q92560 729 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 ANKRD2Q9GZV1 360 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
CAPN3-205ENST00000357568 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 PCDHA4Q9UN74 947 aa11.72□□□□□ -0.53
CAPN3-205ENST00000357568 E7EVH7 732 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 H0YGN5 161 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 MGRN1O60291 552 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 UBA7P41226 1012 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 GUCY2DQ02846 1103 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 NAB2Q15742 525 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 KCTD16Q68DU8 428 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 TLDC1Q6P9B6 456 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 CRELD2Q6UXH1 353 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-205ENST00000357568 SMCR8Q8TEV9 937 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-205ENST00000357568 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 PLAAQ9Y263 795 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 NFS1Q9Y697 457 aa11.71□□□□□ -0.53
CAPN3-205ENST00000357568 FER1L6Q2WGJ9 1857 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms