RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ZNF174Q15697 407 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 GJC2Q5T442 439 aaPredicted RBP17.59■□□□□ 0.41
TRIM13-201ENST00000356017 CYFIP1Q7L576 1253 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 COPS5Q92905 334 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 LENG1Q96BZ8 264 aaPredicted RBP17.59■□□□□ 0.41
TRIM13-201ENST00000356017 CRISPLD2Q9H0B8 497 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 PKD2L1Q9P0L9 805 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 TCEAL9Q9UHQ7 104 aa17.59■□□□□ 0.41
TRIM13-201ENST00000356017 LAD1O00515 517 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 FARP2O94887 1054 aaPredicted RBP17.58■□□□□ 0.41
TRIM13-201ENST00000356017 DDIT3P35638 169 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 CALCRLQ16602 461 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 POTEDQ86YR6 584 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 PPTC7Q8NI37 304 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 ETNPPLQ8TBG4 499 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 SLC5A5Q92911 643 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 SPATA33Q96N06 139 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 JPH1Q9HDC5 661 aaPredicted RBP17.58■□□□□ 0.41
TRIM13-201ENST00000356017 CIZ1Q9ULV3 898 aaPredicted RBP17.58■□□□□ 0.41
TRIM13-201ENST00000356017 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 ATP6V1DQ9Y5K8 247 aa17.58■□□□□ 0.41
TRIM13-201ENST00000356017 A6NJR5 290 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 NOP56O00567 594 aaKnown RBP17.58■□□□□ 0.4
TRIM13-201ENST00000356017 WNT7AO00755 349 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 ZEB2O60315 1214 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 ADAMTS4O75173 837 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 BMP15O95972 392 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 PGK1P00558 417 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 CST5P28325 142 aaPredicted RBP17.58■□□□□ 0.4
TRIM13-201ENST00000356017 ITGB3BPQ13352 177 aaPredicted RBP17.58■□□□□ 0.4
TRIM13-201ENST00000356017 FSCN1Q16658 493 aaKnown RBP17.58■□□□□ 0.4
TRIM13-201ENST00000356017 GNASQ5JWF2 1037 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 LRCH2Q5VUJ6 765 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 PCSK9Q8NBP7 692 aaKnown RBP17.58■□□□□ 0.4
TRIM13-201ENST00000356017 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.58■□□□□ 0.4
TRIM13-201ENST00000356017 SLC9A2Q9UBY0 812 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 CEP131Q9UPN4 1083 aa17.58■□□□□ 0.4
TRIM13-201ENST00000356017 DHX15O43143 795 aaKnown RBP17.57■□□□□ 0.4
TRIM13-201ENST00000356017 GAS7O60861 476 aa17.57■□□□□ 0.4
TRIM13-201ENST00000356017 KRT76Q01546 638 aa17.57■□□□□ 0.4
TRIM13-201ENST00000356017 FOXD4L5Q5VV16 416 aaPredicted RBP17.57■□□□□ 0.4
TRIM13-201ENST00000356017 ANKLE1Q8NAG6 615 aa17.57■□□□□ 0.4
TRIM13-201ENST00000356017 FOXD4L4Q8WXT5 416 aaPredicted RBP17.57■□□□□ 0.4
TRIM13-201ENST00000356017 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
TRIM13-201ENST00000356017 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
TRIM13-201ENST00000356017 DNM1LO00429 736 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 KPNA6O60684 536 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 PSMD10O75832 226 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
TRIM13-201ENST00000356017 NBR1Q14596 966 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 LRRC41Q15345 812 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 DGKDQ16760 1214 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 HSDL1Q3SXM5 330 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 ATL3Q6DD88 541 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 ZNF746Q6NUN9 644 aaPredicted RBP17.56■□□□□ 0.4
TRIM13-201ENST00000356017 KLHDC9Q8NEP7 349 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 AFG1LQ8WV93 481 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 HAS1Q92839 578 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 MTMR9Q96QG7 549 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
TRIM13-201ENST00000356017 PCDHA12Q9UN75 941 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
TRIM13-201ENST00000356017 KBTBD13C9JR72 458 aa17.55■□□□□ 0.4
TRIM13-201ENST00000356017 OR52Z1P0C646 297 aa17.55■□□□□ 0.4
TRIM13-201ENST00000356017 PTGS1P23219 599 aa17.55■□□□□ 0.4
TRIM13-201ENST00000356017 PTGDRQ13258 359 aa17.55■□□□□ 0.4
TRIM13-201ENST00000356017 SMAP1Q8IYB5 467 aaPredicted RBP17.55■□□□□ 0.4
TRIM13-201ENST00000356017 SEPT1Q8WYJ6 367 aa17.55■□□□□ 0.4
TRIM13-201ENST00000356017 BCAS3Q9H6U6 928 aa17.55■□□□□ 0.4
TRIM13-201ENST00000356017 POTEFA5A3E0 1075 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 MOXD2PA6NHM9 499 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 CTAGE5O15320 804 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 SORBS3O60504 671 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 MMP3P08254 477 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 UIMC1Q96RL1 719 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 GPR20Q99678 358 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 TMEM60Q9H2L4 133 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 TTC12Q9H892 705 aaPredicted RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 POLR3EQ9NVU0 708 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 ELP1O95163 1332 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 DDX39AO00148 427 aaKnown RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 HOXD8P13378 290 aaPredicted RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 SFNP31947 248 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 PRPHP41219 470 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 TXKP42681 527 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 ATP2C1P98194 919 aaPredicted RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 BEX3Q00994 111 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 SP4Q02446 784 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 PPP2R5CQ13362 524 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 SF3A1Q15459 793 aaKnown RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 KCNA10Q16322 511 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 ARL6IP4Q66PJ3 421 aaKnown RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 CCSAPQ6IQ19 270 aaPredicted RBP17.54■□□□□ 0.4
TRIM13-201ENST00000356017 C4orf32Q8N8J7 132 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
TRIM13-201ENST00000356017 MYADML2A6NDP7 307 aa17.53■□□□□ 0.4
TRIM13-201ENST00000356017 CCDC85CA6NKD9 419 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms