RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SNX5Q9Y5X3 404 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 MYO9BQ13459 2157 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TJP3O95049 919 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TRPC1P48995 793 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 COG1Q8WTW3 980 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TTC17Q96AE7 1141 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 BICC1Q9H694 974 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 PLA2R1Q13018 1463 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TAP1Q03518 808 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 PDE4DQ08499 809 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 HIC1Q14526 733 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 C20orf194Q5TEA3 1177 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TMEM51Q9NW97 253 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 AGTP01019 485 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 ACAD11Q709F0 780 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 PLA2G4DQ86XP0 818 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 ASPSCR1Q9BZE9 553 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 KLC2Q9H0B6 622 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 YTHDC2Q9H6S0 1430 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 M0R3G1 203 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 SLFN14P0C7P3 912 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 EXOC3L4Q17RC7 722 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 TOM1L2Q6ZVM7 507 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 GDPD2Q9HCC8 539 aa8.64□□□□□ -1.03
HTT-201ENST00000355072 STX18Q9P2W9 335 aaKnown RBP8.64□□□□□ -1.03
HTT-201ENST00000355072 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.037e-7■■■■■ 39.2
HTT-201ENST00000355072 SERPINB3P29508 390 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PUM3Q15397 648 aaKnown RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 SGO2Q562F6 1265 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 NVLO15381 856 aaKnown RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 PTK2Q05397 1052 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 RBM41Q96IZ5 413 aaKnown RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 MAP3K15Q6ZN16 1313 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 SAC3D1A6NKF1 404 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 FCGR1AP12314 374 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 KRT81Q14533 505 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PCNX4Q63HM2 1172 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 VSTM4Q8IW00 320 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 GINS4Q9BRT9 223 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 A6NJR5 290 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 MYBL1P10243 752 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ZSCAN20P17040 1043 aaPredicted RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 CNBD1Q8NA66 436 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 LIN7AO14910 233 aaPredicted RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 ARID5AQ03989 594 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 CEP70Q8NHQ1 597 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PKD2L2Q9NZM6 624 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ANKFY1Q9P2R3 1169 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ZFP69BQ9UJL9 534 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ZHX2Q9Y6X8 837 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PFKFB2O60825 505 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 GUCY2DQ02846 1103 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PPP6R3Q5H9R7 873 aaPredicted RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ATL2Q8NHH9 583 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 C14orf93Q9H972 538 aaKnown RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 CDH16O75309 829 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ELF1P32519 619 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 SLC9C2Q5TAH2 1124 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 C16orf89Q6UX73 402 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 BBS5Q8N3I7 341 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 KBTBD3Q8NAB2 608 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 SH3GL2Q99962 352 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ATP8B3O60423 1300 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 DAB1O75553 588 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ATP2B3Q16720 1220 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 KLHL12Q53G59 568 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 IFNL2Q8IZJ0 200 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 CASP10Q92851 521 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PITPNM3Q9BZ71 974 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 FAM83GA6ND36 823 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 SNTNA6NMZ2 147 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 TRMT112Q9UI30 125 aaKnown RBP8.63□□□□□ -1.03
HTT-201ENST00000355072 MYO1FO00160 1098 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 NDUFA10O95299 355 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 PDE1BQ01064 536 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 ICA1Q05084 483 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 RASA3Q14644 834 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 OLFML2BQ68BL8 750 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 JDP2Q8WYK2 163 aa8.63□□□□□ -1.03
HTT-201ENST00000355072 TBC1D4O60343 1298 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 CHRNA3P32297 505 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 C1orf146Q5VVC0 180 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 SRLQ86TD4 932 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 MYOCDQ8IZQ8 938 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 NAF1Q96HR8 494 aaKnown RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 APOL4Q9BPW4 351 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 OSBPL5Q9H0X9 879 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 CAB39Q9Y376 341 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 TSC22D4Q9Y3Q8 395 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 COL4A3BPQ9Y5P4 624 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 TNPO2O14787 897 aaKnown RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 MAGEA1P43355 309 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 TAB1Q15750 504 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms