RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LRRC53A6NM62 1247 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 C21orf2O43822 256 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 POLR2MP0CAP2 368 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 CYP2D6P10635 497 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 UNC13DQ70J99 1090 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 PAF1Q8N7H5 531 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 VTI1AQ96AJ9 217 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 OSBPL9Q96SU4 736 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 FAM170AA1A519 330 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 TPH2Q8IWU9 490 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 HNRNPLLQ8WVV9 542 aaKnown RBP16.1■□□□□ 0.17
NUP50-201ENST00000347635 MMS19Q96T76 1030 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 CHP1Q99653 195 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 TCHPQ9BT92 498 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 EXOC7Q9UPT5 735 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 SALL1Q9NSC2 1324 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 HMGB1P1B2RPK0 211 aaPredicted RBP16.1■□□□□ 0.17
NUP50-201ENST00000347635 CYP2J2P51589 502 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 KCNB1Q14721 858 aa16.1■□□□□ 0.17
NUP50-201ENST00000347635 PRKG1Q13976 671 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 SNCBQ16143 134 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
NUP50-201ENST00000347635 FERP16591 822 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 ZBTB16Q05516 673 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 USP17L2Q6R6M4 530 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 HOMER2Q9NSB8 354 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 PXDNQ92626 1479 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 CCDC169A6NNP5 214 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 PP2D1A8MPX8 630 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 RAD17O75943 681 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 AMNQ9BXJ7 453 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
NUP50-201ENST00000347635 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
NUP50-201ENST00000347635 GCFC2P16383 781 aaKnown RBP16.08■□□□□ 0.17
NUP50-201ENST00000347635 LMNB1P20700 586 aa16.08■□□□□ 0.17
NUP50-201ENST00000347635 NAA35Q5VZE5 725 aa16.08■□□□□ 0.17
NUP50-201ENST00000347635 MAEAQ7L5Y9 396 aa16.08■□□□□ 0.17
NUP50-201ENST00000347635 CEP72Q9P209 647 aa16.08■□□□□ 0.17
NUP50-201ENST00000347635 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.17
NUP50-201ENST00000347635 ZBTB22O15209 634 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 PALMO75781 387 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 MYCLP12524 364 aaPredicted RBP16.08■□□□□ 0.16
NUP50-201ENST00000347635 PDCLQ13371 301 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 ARMC9Q7Z3E5 817 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 MGARPQ8TDB4 240 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 HOMER3Q9NSC5 361 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 FAM169AQ9Y6X4 670 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 MEGF6O75095 1541 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 NOP56O00567 594 aaKnown RBP16.08■□□□□ 0.16
NUP50-201ENST00000347635 GFPT1Q06210 699 aaPredicted RBP16.08■□□□□ 0.16
NUP50-201ENST00000347635 RDH13Q8NBN7 331 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 FUT8Q9BYC5 575 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 RABGAP1Q9Y3P9 1069 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 ITPK1Q13572 414 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 CUL1Q13616 776 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 WDR44Q5JSH3 913 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 COA7Q96BR5 231 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 AZI2Q9H6S1 392 aa16.08■□□□□ 0.16
NUP50-201ENST00000347635 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
NUP50-201ENST00000347635 ADSSL1Q8N142 457 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 SRBD1Q8N5C6 995 aaKnown RBP16.07■□□□□ 0.16
NUP50-201ENST00000347635 LRRN4CLQ8ND94 238 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 COL5A2P05997 1499 aaPredicted RBP16.07■□□□□ 0.16
NUP50-201ENST00000347635 CLRN2A0PK11 232 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 PPP1R3GB7ZBB8 358 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 SLC8A1P32418 973 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 GBP1P32455 592 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 PPP1R14CQ8TAE6 165 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 MAIP1Q8WWC4 291 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 RUBCNQ92622 972 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 PSMD14O00487 310 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 GRM4Q14833 912 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 TRIM10Q9UDY6 481 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 ECE2O60344 883 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 CCDC125Q86Z20 511 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUP50-201ENST00000347635 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
NUP50-201ENST00000347635 ORC4O43929 436 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 ATP2A2P16615 1042 aaKnown RBP16.06■□□□□ 0.16
NUP50-201ENST00000347635 CRKP46108 304 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 MMS22LQ6ZRQ5 1243 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 ANKRD42Q8N9B4 389 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 GJA10Q969M2 543 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 PVALEFA0A1B0GWK0 134 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 HGSO14964 777 aaPredicted RBP16.06■□□□□ 0.16
NUP50-201ENST00000347635 NCK2O43639 380 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 FYB2Q5VWT5 728 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 DDX39AO00148 427 aaKnown RBP16.06■□□□□ 0.16
NUP50-201ENST00000347635 NTSR2O95665 410 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 CCNA1P78396 465 aa16.06■□□□□ 0.16
NUP50-201ENST00000347635 DHX9Q08211 1270 aaKnown RBP16.06■□□□□ 0.16
NUP50-201ENST00000347635 ICE2Q659A1 982 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms