RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TDRD12Q587J7 1177 aaKnown RBP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 SFMBT2Q5VUG0 894 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 CACNA2D4Q7Z3S7 1137 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 CEP57Q86XR8 500 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 FMNL3Q8IVF7 1028 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 PROM2Q8N271 834 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 OR2W6PQ8NHA6 318 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 GPKOWQ92917 476 aaPredicted RBP eCLIP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 NEUROG2Q9H2A3 272 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 SLC12A4Q9UP95 1085 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 DCCP43146 1447 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 MYH7BA7E2Y1 1941 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 COL5A2P05997 1499 aaPredicted RBP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 A0A0G2JS52 829 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 STXBP3O00186 592 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 OPLAHO14841 1288 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 KIF4AO95239 1232 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 ATP6V1G2O95670 118 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 TMOD1P28289 359 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 ORC2Q13416 577 aaPredicted RBP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 HLTFQ14527 1009 aaKnown RBP eCLIP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 EP400NLQ6ZTU2 488 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 TMC3Q7Z5M5 1100 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 ANKS1AQ92625 1134 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 SLC39A2Q9NP94 309 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.61□□□□□ -0.71
HOXA1-201ENST00000343060 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 FBXL5Q9UKA1 691 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 MYH4Q9Y623 1939 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
HOXA1-201ENST00000343060 CCDC188H7C350 402 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 KIF3CO14782 793 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 CLNS1AP54105 237 aaKnown RBP10.6□□□□□ -0.71
HOXA1-201ENST00000343060 DYNLL1P63167 89 aaKnown RBP10.6□□□□□ -0.71
HOXA1-201ENST00000343060 GRM4Q14833 912 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 ZCWPW2Q504Y3 356 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 KLHL7Q8IXQ5 586 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 LRRC57Q8N9N7 239 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 HPS3Q969F9 1004 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 SCLT1Q96NL6 688 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 TXLNGYQ9BZA5 131 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 FAM129AQ9BZQ8 928 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 SLITRK6Q9H5Y7 841 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 NOD2Q9HC29 1040 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 RIC8AQ9NPQ8 531 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 TMOD3Q9NYL9 352 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 AIPL1Q9NZN9 384 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 PHLPP1O60346 1717 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 CCT8L1PA6NM43 557 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 F8VZ95 297 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 IL2RBP14784 551 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 ITIH4Q14624 930 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 RPS6KA1Q15418 735 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 C10orf76Q5T2E6 689 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 RASGEF1CQ8N431 466 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 CEP120Q8N960 986 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 ZNF384Q8TF68 577 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 TAF4BQ92750 862 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 CUL5Q93034 780 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 CHMP6Q96FZ7 201 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 ZNF317Q96PQ6 595 aaPredicted RBP10.6□□□□□ -0.71
HOXA1-201ENST00000343060 XPO6Q96QU8 1125 aaKnown RBP10.6□□□□□ -0.71
HOXA1-201ENST00000343060 BLOC1S4Q9NUP1 217 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 BARHL2Q9NY43 387 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 PACSIN2Q9UNF0 486 aaPredicted RBP10.6□□□□□ -0.71
HOXA1-201ENST00000343060 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.6□□□□□ -0.71
HOXA1-201ENST00000343060 ITGB4P16144 1822 aa10.6□□□□□ -0.71
HOXA1-201ENST00000343060 MYMKA6NI61 221 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 USP17L12C9JPN9 530 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 USP17L21D6R901 530 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 TRIM37O94972 964 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 GNAQP50148 359 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 EIF3BP55884 814 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 MARSP56192 900 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 C11orf91Q3C1V1 193 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 SBK1Q52WX2 424 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 PSMD1Q99460 953 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 TRIM6Q9C030 488 aaPredicted RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 NOVA2Q9UNW9 492 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 A0A087X0T9 212 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 CFAP73A6NFT4 308 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 PGRMC1O00264 195 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 ASAP2O43150 1006 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 SART1O43290 800 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 ZPR1O75312 459 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 SSBP05455 408 aaKnown RBP eCLIP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 FAM228BP0C875 321 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 PAX7P23759 505 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 MAGOHP61326 146 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 GRB10Q13322 594 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 KIAA0753Q2KHM9 967 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms