RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
RET-201ENST00000340058 WHAMMP3Q1A5X7 153 aa16.09■□□□□ 0.17
RET-201ENST00000340058 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
RET-201ENST00000340058 CHP1Q99653 195 aa16.09■□□□□ 0.17
RET-201ENST00000340058 MAGEF1Q9HAY2 307 aa16.09■□□□□ 0.17
RET-201ENST00000340058 AFPP02771 609 aaKnown RBP16.08■□□□□ 0.17
RET-201ENST00000340058 KIF11P52732 1056 aa16.08■□□□□ 0.17
RET-201ENST00000340058 UBL4BQ8N7F7 174 aa16.08■□□□□ 0.17
RET-201ENST00000340058 CERKQ8TCT0 537 aa16.08■□□□□ 0.17
RET-201ENST00000340058 DYDC2Q96IM9 177 aa16.08■□□□□ 0.17
RET-201ENST00000340058 APOL6Q9BWW8 343 aa16.08■□□□□ 0.17
RET-201ENST00000340058 CNTNAP5Q8WYK1 1306 aa16.08■□□□□ 0.17
RET-201ENST00000340058 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
RET-201ENST00000340058 TMOD1P28289 359 aa16.08■□□□□ 0.16
RET-201ENST00000340058 MYL7Q01449 175 aa16.08■□□□□ 0.16
RET-201ENST00000340058 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.16
RET-201ENST00000340058 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
RET-201ENST00000340058 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
RET-201ENST00000340058 NUCKS1Q9H1E3 243 aaKnown RBP16.08■□□□□ 0.16
RET-201ENST00000340058 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
RET-201ENST00000340058 SH3GLB2Q9NR46 395 aa16.08■□□□□ 0.16
RET-201ENST00000340058 UTP11Q9Y3A2 253 aaKnown RBP16.08■□□□□ 0.16
RET-201ENST00000340058 TUBBP07437 444 aa16.08■□□□□ 0.16
RET-201ENST00000340058 PDHBP11177 359 aa16.08■□□□□ 0.16
RET-201ENST00000340058 TOB1P50616 345 aaPredicted RBP16.08■□□□□ 0.16
RET-201ENST00000340058 GYS2P54840 703 aa16.08■□□□□ 0.16
RET-201ENST00000340058 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
RET-201ENST00000340058 KRT71Q3SY84 523 aa16.08■□□□□ 0.16
RET-201ENST00000340058 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
RET-201ENST00000340058 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
RET-201ENST00000340058 PARD6BQ9BYG5 372 aa16.08■□□□□ 0.16
RET-201ENST00000340058 HDAC6Q9UBN7 1215 aa16.08■□□□□ 0.16
RET-201ENST00000340058 EBAG9O00559 213 aa16.07■□□□□ 0.16
RET-201ENST00000340058 FAM47CQ5HY64 1035 aa16.07■□□□□ 0.16
RET-201ENST00000340058 ANKRD40Q6AI12 368 aa16.07■□□□□ 0.16
RET-201ENST00000340058 UNC13DQ70J99 1090 aa16.07■□□□□ 0.16
RET-201ENST00000340058 WDR24Q96S15 920 aa16.07■□□□□ 0.16
RET-201ENST00000340058 VEGFAP15692 232 aaPredicted RBP16.07■□□□□ 0.16
RET-201ENST00000340058 PSMC2P35998 433 aaKnown RBP16.07■□□□□ 0.16
RET-201ENST00000340058 PPP1R14CQ8TAE6 165 aa16.07■□□□□ 0.16
RET-201ENST00000340058 MTA3Q9BTC8 594 aa16.07■□□□□ 0.16
RET-201ENST00000340058 KMT5AQ9NQR1 393 aa16.07■□□□□ 0.16
RET-201ENST00000340058 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
RET-201ENST00000340058 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
RET-201ENST00000340058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
RET-201ENST00000340058 COASYQ13057 564 aa16.07■□□□□ 0.16
RET-201ENST00000340058 GRIK5Q16478 980 aa16.07■□□□□ 0.16
RET-201ENST00000340058 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
RET-201ENST00000340058 TRIM9Q9C026 710 aa16.07■□□□□ 0.16
RET-201ENST00000340058 C1orf112Q9NSG2 853 aa16.07■□□□□ 0.16
RET-201ENST00000340058 TFR2Q9UP52 801 aa16.07■□□□□ 0.16
RET-201ENST00000340058 LGALS16A8MUM7 142 aa16.06■□□□□ 0.16
RET-201ENST00000340058 NDUFAB1O14561 156 aa16.06■□□□□ 0.16
RET-201ENST00000340058 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
RET-201ENST00000340058 ZBTB33Q86T24 672 aa16.06■□□□□ 0.16
RET-201ENST00000340058 SESTD1Q86VW0 696 aa16.06■□□□□ 0.16
RET-201ENST00000340058 MMS19Q96T76 1030 aa16.06■□□□□ 0.16
RET-201ENST00000340058 CCDC77Q9BR77 488 aa16.06■□□□□ 0.16
RET-201ENST00000340058 UBE2TQ9NPD8 197 aaPredicted RBP16.06■□□□□ 0.16
RET-201ENST00000340058 ABHD10Q9NUJ1 306 aa16.06■□□□□ 0.16
RET-201ENST00000340058 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
RET-201ENST00000340058 KIF4AO95239 1232 aa16.06■□□□□ 0.16
RET-201ENST00000340058 VIMP08670 466 aaKnown RBP16.06■□□□□ 0.16
RET-201ENST00000340058 SRGAP2CP0DJJ0 459 aa16.06■□□□□ 0.16
RET-201ENST00000340058 FXR1P51114 621 aaKnown RBP eCLIP16.06■□□□□ 0.16
RET-201ENST00000340058 RASA3Q14644 834 aa16.06■□□□□ 0.16
RET-201ENST00000340058 SBK1Q52WX2 424 aa16.06■□□□□ 0.16
RET-201ENST00000340058 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
RET-201ENST00000340058 MICALL1Q8N3F8 863 aa16.06■□□□□ 0.16
RET-201ENST00000340058 CRAMP1Q96RY5 1269 aa16.06■□□□□ 0.16
RET-201ENST00000340058 DNAI2Q9GZS0 605 aa16.06■□□□□ 0.16
RET-201ENST00000340058 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
RET-201ENST00000340058 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
RET-201ENST00000340058 CLCN6P51797 869 aa16.06■□□□□ 0.16
RET-201ENST00000340058 TUBB4BP68371 445 aa16.06■□□□□ 0.16
RET-201ENST00000340058 PTPAQ15257 358 aa16.06■□□□□ 0.16
RET-201ENST00000340058 LIN9Q5TKA1 542 aa16.06■□□□□ 0.16
RET-201ENST00000340058 E4F1Q66K89 784 aaPredicted RBP16.06■□□□□ 0.16
RET-201ENST00000340058 KAZNQ674X7 775 aa16.06■□□□□ 0.16
RET-201ENST00000340058 SLC7A3Q8WY07 619 aa16.06■□□□□ 0.16
RET-201ENST00000340058 STK24Q9Y6E0 443 aa16.06■□□□□ 0.16
RET-201ENST00000340058 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
RET-201ENST00000340058 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
RET-201ENST00000340058 EZRP15311 586 aaKnown RBP16.05■□□□□ 0.16
RET-201ENST00000340058 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
RET-201ENST00000340058 TCP1P17987 556 aaKnown RBP16.05■□□□□ 0.16
RET-201ENST00000340058 RCAN1P53805 252 aa16.05■□□□□ 0.16
RET-201ENST00000340058 PAK2Q13177 524 aa16.05■□□□□ 0.16
RET-201ENST00000340058 RNF207Q6ZRF8 634 aa16.05■□□□□ 0.16
RET-201ENST00000340058 PTPN22Q9Y2R2 807 aa16.05■□□□□ 0.16
RET-201ENST00000340058 COL5A2P05997 1499 aaPredicted RBP16.05■□□□□ 0.16
RET-201ENST00000340058 LRRC53A6NM62 1247 aa16.05■□□□□ 0.16
RET-201ENST00000340058 GCLMP48507 274 aa16.05■□□□□ 0.16
RET-201ENST00000340058 NTRK3Q16288 839 aa16.05■□□□□ 0.16
RET-201ENST00000340058 COL23A1Q86Y22 540 aaPredicted RBP16.05■□□□□ 0.16
RET-201ENST00000340058 RAD54LQ92698 747 aa16.05■□□□□ 0.16
RET-201ENST00000340058 IQCGQ9H095 443 aaKnown RBP16.05■□□□□ 0.16
RET-201ENST00000340058 TCRBV5S4A2TA0A5A2 114 aa16.05■□□□□ 0.16
RET-201ENST00000340058 MGARPQ8TDB4 240 aa16.05■□□□□ 0.16
RET-201ENST00000340058 NXF1Q9UBU9 619 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms