RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TRIP13Q15645 432 aaPredicted RBP13.81□□□□□ -0.2
USP47-202ENST00000339865 NBPF9Q3BBW0 867 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 CCDC103Q8IW40 242 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 TESK2Q96S53 571 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 MYL10Q9BUA6 226 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 IQANK1A0A1B0GTG1 560 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 K7ENM7 598 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 DIAPH2O60879 1101 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 LRRN2O75325 713 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 ADCY7P51828 1080 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 SEMA3FQ13275 785 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 SPARCL1Q14515 664 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 SRRM1Q8IYB3 904 aaKnown RBP13.81□□□□□ -0.2
USP47-202ENST00000339865 SIKE1Q9BRV8 207 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 CYP4F11Q9HBI6 524 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 DNAJC17Q9NVM6 304 aaKnown RBP13.81□□□□□ -0.2
USP47-202ENST00000339865 RRM2BQ7LG56 351 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 SLC17A8Q8NDX2 589 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 OSBPL10Q9BXB5 764 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
USP47-202ENST00000339865 H2AFZP0C0S5 128 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 DRP2Q13474 957 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 RARS2Q5T160 578 aaKnown RBP13.81□□□□□ -0.2
USP47-202ENST00000339865 C10orf76Q5T2E6 689 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 H2AFVQ71UI9 128 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 WDR75Q8IWA0 830 aaKnown RBP13.81□□□□□ -0.2
USP47-202ENST00000339865 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 ATP8B2P98198 1209 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 FAM47EQ6ZV65 393 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 MTBPQ96DY7 904 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 NT5C3AQ9H0P0 336 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 RUBCNLQ9H714 662 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 ZFP69BQ9UJL9 534 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 KIAA1107Q9UPP5 1409 aa13.81□□□□□ -0.2
USP47-202ENST00000339865 EFTUD2Q15029 972 aaKnown RBP eCLIP13.8□□□□□ -0.2
USP47-202ENST00000339865 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 NLRX1Q86UT6 975 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 FANCLQ9NW38 375 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 SERTAD1Q9UHV2 236 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 PCDHA12Q9UN75 941 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 HSPA1AP0DMV8 641 aaKnown RBP13.8□□□□□ -0.2
USP47-202ENST00000339865 HSPA1BP0DMV9 641 aaKnown RBP13.8□□□□□ -0.2
USP47-202ENST00000339865 RAD23BP54727 409 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 ACAD11Q709F0 780 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 REXO1Q8N1G1 1221 aaKnown RBP13.8□□□□□ -0.2
USP47-202ENST00000339865 TUBGCP3Q96CW5 907 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 TSC22D2O75157 780 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 ATP5HO75947 161 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 MMEP08473 750 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 PTK2Q05397 1052 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 AARS2Q5JTZ9 985 aaKnown RBP13.8□□□□□ -0.2
USP47-202ENST00000339865 GTSE1Q9NYZ3 720 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 RASSF3Q86WH2 238 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 BNIP3LO60238 219 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 N4BP1O75113 896 aaKnown RBP13.8□□□□□ -0.2
USP47-202ENST00000339865 SERPINB1P30740 379 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 DMPKQ09013 629 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 INPP5DQ92835 1189 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 DCTN4Q9UJW0 460 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 NDE1Q9NXR1 346 aa13.8□□□□□ -0.2
USP47-202ENST00000339865 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 ECEL1O95672 775 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 ARPP19P56211 112 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 PLEKHM2Q8IWE5 1019 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 TEKT4Q8WW24 435 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 FAM161BQ96MY7 647 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 RHBDL2Q9NX52 303 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 AATFQ9NY61 560 aaKnown RBP eCLIP13.79□□□□□ -0.2
USP47-202ENST00000339865 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 LRRC9Q6ZRR7 1453 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 GYS2P54840 703 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 H7C1D1 291 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
USP47-202ENST00000339865 EPHB1P54762 984 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 BTBD6Q96KE9 485 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 ADPGKQ9BRR6 497 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 FOXO3O43524 673 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 GSPT1P15170 499 aaKnown RBP13.79□□□□□ -0.2
USP47-202ENST00000339865 LUZP2Q86TE4 346 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 CECR2Q9BXF3 1484 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 COBLO75128 1261 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 CAPN1P07384 714 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 MYO1EQ12965 1108 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 EPM2AIP1Q7L775 607 aaPredicted RBP13.79□□□□□ -0.2
USP47-202ENST00000339865 ARHGAP18Q8N392 663 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 ARMT1Q9H993 441 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 SLC39A2Q9NP94 309 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 MRPL40Q9NQ50 206 aaKnown RBP13.79□□□□□ -0.2
USP47-202ENST00000339865 MYO1CO00159 1063 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 TMEM60Q9H2L4 133 aa13.79□□□□□ -0.2
USP47-202ENST00000339865 NACADO15069 1562 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms