RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 SENP7Q9BQF6 1050 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 ANP32EQ9BTT0 268 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 BEGAINQ9BUH8 593 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 CCDC39Q9UFE4 941 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 KDM3AQ9Y4C1 1321 aa16.36■□□□□ 0.21
NIPAL3-202ENST00000339255 NR1I2O75469 434 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 GNRH1P01148 92 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 KRT76Q01546 638 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 OLFML2BQ68BL8 750 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 OTOP1Q7RTM1 612 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 RASSF8Q8NHQ8 419 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 SCFD2Q8WU76 684 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 TIGD1Q96MW7 591 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 TINF2Q9BSI4 451 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 GJD2Q9UKL4 321 aa16.35■□□□□ 0.21
NIPAL3-202ENST00000339255 MYH9P35579 1960 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 DHX15O43143 795 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 ZNF202O95125 648 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 KCNA2P16389 499 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 SEMA3FQ13275 785 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 ARHGEF6Q15052 776 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 USP49Q70CQ1 688 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CABP7Q86V35 215 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 KCTD17Q8N5Z5 321 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 IQUBQ8NA54 791 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 GJA10Q969M2 543 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CALML4Q96GE6 196 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 DISC1Q9NRI5 854 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 SFNP31947 248 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 NEDD9Q14511 834 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CCDC183Q5T5S1 534 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 B3GNT9Q6UX72 402 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 SEPT14Q6ZU15 432 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 RDM1Q8NG50 284 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 NEK9Q8TD19 979 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CDK5RAP3Q96JB5 506 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 NT5C3AQ9H0P0 336 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 ABHD16BQ9H3Z7 469 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CUEDC2Q9H467 287 aa16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 HOOK1Q9UJC3 728 aaKnown RBP16.34■□□□□ 0.21
NIPAL3-202ENST00000339255 PP2D1A8MPX8 630 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 GPR25O00155 361 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 POLR2DO15514 142 aaKnown RBP16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 HOXD10P28358 340 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 JAK3P52333 1124 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 TTLL4Q14679 1199 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 NCAPH2Q6IBW4 605 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 ZNF746Q6NUN9 644 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 KANK3Q6NY19 840 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 NPLOC4Q8TAT6 608 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 ERO1AQ96HE7 468 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 CLSTN2Q9H4D0 955 aa16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 JPH1Q9HDC5 661 aaPredicted RBP16.33■□□□□ 0.2
NIPAL3-202ENST00000339255 WDR64B1ANS9 1081 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 CTAGE5O15320 804 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 MUTP22033 750 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 RPA1P27694 616 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 CTGFP29279 349 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 CDC25AP30304 524 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 HYIQ5T013 277 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 FBXO16Q8IX29 292 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 UIMC1Q96RL1 719 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 MMTAG2Q9BU76 263 aaKnown RBP16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 ARHGAP39Q9C0H5 1083 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 MAGEF1Q9HAY2 307 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 PKD2L1Q9P0L9 805 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 SLC9A2Q9UBY0 812 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 STK17AQ9UEE5 414 aa16.32■□□□□ 0.2
NIPAL3-202ENST00000339255 FKTNO75072 461 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 ATP9AO75110 1047 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 LETM1O95202 739 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 SNAI1O95863 264 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 SLFN14P0C7P3 912 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 CCT6AP40227 531 aaKnown RBP16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 STAT6P42226 847 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 RRAGBQ5VZM2 374 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 EEPD1Q7L9B9 569 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 CEP57L1Q8IYX8 460 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 PDILTQ8N807 584 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 POLR3CQ9BUI4 534 aaPredicted RBP16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 NRBP1Q9UHY1 535 aa16.31■□□□□ 0.2
NIPAL3-202ENST00000339255 RBM47A0AV96 593 aaKnown RBP16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 CHMP2AO43633 222 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 PCNTO95613 3336 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 CYP2B6P20813 491 aa16.3■□□□□ 0.2
NIPAL3-202ENST00000339255 EPHA7Q15375 998 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms