RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 BLOC1S4Q9NUP1 217 aa11.16□□□□□ -0.62
HIF1A-202ENST00000337138 PARP14Q460N5 1801 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 IGKV6D-41A0A0C4DH26 115 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 CCNE1P24864 410 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.62
HIF1A-202ENST00000337138 HGSNATQ68CP4 663 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 CCNI2Q6ZMN8 369 aaPredicted RBP11.15□□□□□ -0.62
HIF1A-202ENST00000337138 AENQ8WTP8 325 aaKnown RBP11.15□□□□□ -0.62
HIF1A-202ENST00000337138 BAP1Q92560 729 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 ERGIC2Q96RQ1 377 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 C7orf25Q9BPX7 421 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 NDST4Q9H3R1 872 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 SMIM23A6NLE4 172 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 GUCY2CP25092 1073 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 SLC1A4P43007 532 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 PPP4CP60510 307 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 ITIH3Q06033 890 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 UBE2SQ16763 222 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 CFAP58Q5T655 872 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 SPATA4Q8NEY3 305 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 ARL8AQ96BM9 186 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 TMEM47Q9BQJ4 181 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 C6orf50Q9HD87 102 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■■■■■ 71
HIF1A-202ENST00000337138 BARHL2Q9NY43 387 aa11.15□□□□□ -0.62
HIF1A-202ENST00000337138 CCDC172P0C7W6 258 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 SLC16A2P36021 539 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 NT5C2P49902 561 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 CLNS1AP54105 237 aaKnown RBP11.15□□□□□ -0.63
HIF1A-202ENST00000337138 E2F5Q15329 346 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 TBC1D9BQ66K14 1250 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 DGKHQ86XP1 1220 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 SETDB2Q96T68 719 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 ATP8A2Q9NTI2 1148 aa11.15□□□□□ -0.63
HIF1A-202ENST00000337138 TDP2O95551 362 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 MYL1P05976 194 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 VAV2P52735 878 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 CALCRLQ16602 461 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 CENPPQ6IPU0 288 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 CCDC113Q9H0I3 377 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 PPANQ9NQ55 473 aaKnown RBP11.14□□□□□ -0.63
HIF1A-202ENST00000337138 ADAMTS1Q9UHI8 967 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 GRIN2DO15399 1336 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 TARSL2A2RTX5 802 aaKnown RBP11.14□□□□□ -0.63
HIF1A-202ENST00000337138 SNHG28P0DPA3 235 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 NAA35Q5VZE5 725 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 LRRC55Q6ZSA7 311 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 RPAINQ86UA6 219 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 TRIM58Q8NG06 486 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 CRYGNQ8WXF5 182 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 TAF4BQ92750 862 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 OSBPL9Q96SU4 736 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 EYA3Q99504 573 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 LSM14BQ9BX40 385 aaKnown RBP11.14□□□□□ -0.63
HIF1A-202ENST00000337138 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
HIF1A-202ENST00000337138 FAM169AQ9Y6X4 670 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 NOL4O94818 638 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 PEX19P40855 299 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
HIF1A-202ENST00000337138 TBC1D5Q92609 795 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 PNMA5Q96PV4 448 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 TSG101Q99816 390 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
HIF1A-202ENST00000337138 ARHGAP20Q9P2F6 1191 aa11.14□□□□□ -0.63
HIF1A-202ENST00000337138 HEXIM1O94992 359 aaKnown RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 RPSAP08865 295 aaKnown RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 GUCY1A3Q02108 690 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 LLGL1Q15334 1064 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 KRT79Q5XKE5 535 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 CCDC121Q6ZUS5 278 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 REXO1Q8N1G1 1221 aaKnown RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 NUP58Q9BVL2 599 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 CXorf56Q9H5V9 222 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 LOXHD1Q8IVV2 1947 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 BRWD3Q6RI45 1802 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 NPHP3-ACAD11A0A0J9YXS1 232 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 PJA2O43164 708 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 OPA1O60313 960 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 TUBBP07437 444 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 MYBP10242 640 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 CARSP49589 748 aaKnown RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 TRADDQ15628 312 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 ECM1Q16610 540 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 KIAA0753Q2KHM9 967 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
HIF1A-202ENST00000337138 TEX11Q8IYF3 940 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 FAM133AQ8N9E0 248 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 NOX5Q96PH1 765 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 SPAG5Q96R06 1193 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 AP1M1Q9BXS5 423 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 CEP104O60308 925 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
HIF1A-202ENST00000337138 IRAK1P51617 712 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms