RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PDE11AQ9HCR9 933 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 ZCCHC17Q9NP64 241 aaKnown RBP13.04□□□□□ -0.32
HDAC6-201ENST00000334136 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 CTNND2Q9UQB3 1225 aa13.04□□□□□ -0.32
HDAC6-201ENST00000334136 FAM13AO94988 1023 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 PPIL2Q13356 520 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 STXBP2Q15833 593 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 RGMBQ6NW40 437 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 DLK2Q6UY11 383 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 ANKRD13CQ8N6S4 541 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 PLEKHA4Q9H4M7 779 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
HDAC6-201ENST00000334136 CNTNAP5Q8WYK1 1306 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 SLC25A27O95847 323 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-201ENST00000334136 KRT83P78385 493 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-201ENST00000334136 TKFCQ3LXA3 575 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 MLKLQ8NB16 471 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 ANKS1AQ92625 1134 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
HDAC6-201ENST00000334136 PCDHA5Q9Y5H7 936 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 USP2O75604 605 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-201ENST00000334136 EEF2KMTQ96G04 330 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 SERTAD1Q9UHV2 236 aa13.03□□□□□ -0.32
HDAC6-201ENST00000334136 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-201ENST00000334136 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-201ENST00000334136 ARHGAP4P98171 946 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 WDR18Q9BV38 432 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 EPC1Q9H2F5 836 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 NDUFAB1O14561 156 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 PNMA6AP0CW24 399 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-201ENST00000334136 MKL1Q969V6 931 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 AGXT2Q9BYV1 514 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 TAF1LQ8IZX4 1826 aa13.02□□□□□ -0.32
HDAC6-201ENST00000334136 PDHXO00330 501 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 OPA1O60313 960 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 SLC39A14Q15043 492 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 RCOR1Q9UKL0 485 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 TMEM88BA6NKF7 163 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 RESTQ13127 1097 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 BICD1Q96G01 975 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 WDR11Q9BZH6 1224 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 NT5C3AQ9H0P0 336 aa13.02□□□□□ -0.33
HDAC6-201ENST00000334136 COBLO75128 1261 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 HERVK_113P62684 666 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 SF3A3Q12874 501 aaKnown RBP eCLIP13.01□□□□□ -0.332e-7■■■□□ 18
HDAC6-201ENST00000334136 L3MBTL3Q96JM7 780 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-201ENST00000334136 PCDHB6Q9Y5E3 794 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 GOLGA6CA6NDK9 693 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 LAD1O00515 517 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 FOXP2O15409 715 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 CALRP27797 417 aaKnown RBP13.01□□□□□ -0.33
HDAC6-201ENST00000334136 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 ICAM1P05362 532 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 TUBBP07437 444 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 VAV2P52735 878 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 SHROOM1Q2M3G4 852 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-201ENST00000334136 CHST13Q8NET6 341 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 P2RX7Q99572 595 aaKnown RBP13.01□□□□□ -0.33
HDAC6-201ENST00000334136 TCHPQ9BT92 498 aa13.01□□□□□ -0.33
HDAC6-201ENST00000334136 FGRP09769 529 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 CMA1P23946 247 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 HPDP32754 393 aaPredicted RBP13□□□□□ -0.33
HDAC6-201ENST00000334136 FAM47CQ5HY64 1035 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 POLR3EQ9NVU0 708 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 GINS2Q9Y248 185 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 A0A1W2PRG0 241 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 TOMM70O94826 608 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 CTDNEP1O95476 244 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 ALDH1A1P00352 501 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 DSG3P32926 999 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 INHBEP58166 350 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 MAEAQ7L5Y9 396 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 OTUD6AQ7L8S5 288 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 FBXL16Q8N461 479 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 PROCA1Q8NCQ7 364 aaPredicted RBP13□□□□□ -0.33
HDAC6-201ENST00000334136 ASCC2Q9H1I8 757 aaPredicted RBP13□□□□□ -0.33
HDAC6-201ENST00000334136 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 CPA4Q9UI42 421 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 SYNPO2Q9UMS6 1093 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 SPEF2Q9C093 1822 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 STXBP3O00186 592 aa13□□□□□ -0.33
HDAC6-201ENST00000334136 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
HDAC6-201ENST00000334136 FDPSP14324 419 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms