RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 FLRT1Q9NZU1 646 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
PRPF18-201ENST00000320054 SLC26A4O43511 780 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 ATP9AO75110 1047 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 CCL14Q16627 93 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 TAPT1Q6NXT6 567 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 CCDC62Q6P9F0 684 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 EEPD1Q7L9B9 569 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 OTOP1Q7RTM1 612 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 FBXO16Q8IX29 292 aaPredicted RBP15.33■□□□□ 0.04
PRPF18-201ENST00000320054 GJA10Q969M2 543 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 SDF4Q9BRK5 362 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 CCSER1Q9C0I3 900 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 FAM13BQ9NYF5 915 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 NRBP1Q9UHY1 535 aa15.33■□□□□ 0.04
PRPF18-201ENST00000320054 MBD3O95983 291 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 KRT76Q01546 638 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 NEDD9Q14511 834 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 TTLL4Q14679 1199 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 UIMC1Q96RL1 719 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 DDX41Q9UJV9 622 aaKnown RBP15.32■□□□□ 0.04
PRPF18-201ENST00000320054 HPSEQ9Y251 543 aa15.32■□□□□ 0.04
PRPF18-201ENST00000320054 POTEMA6NI47 508 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 PFKFB1P16118 471 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
PRPF18-201ENST00000320054 TXLNAP40222 546 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 UBA7P41226 1012 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 SP2Q02086 613 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 SKOR2Q2VWA4 1001 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-201ENST00000320054 MFSD14CQ5VZR4 134 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 IQSEC1Q6DN90 963 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 ZNF746Q6NUN9 644 aaPredicted RBP15.31■□□□□ 0.04
PRPF18-201ENST00000320054 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 USP49Q70CQ1 688 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 RDM1Q8NG50 284 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 TRIB2Q92519 343 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
PRPF18-201ENST00000320054 EPSTI1Q96J88 318 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 UNC45AQ9H3U1 944 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 PDGFCQ9NRA1 345 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 PKD2L1Q9P0L9 805 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 TCEAL9Q9UHQ7 104 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 TSKSQ9UJT2 592 aa15.31■□□□□ 0.04
PRPF18-201ENST00000320054 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 NKRFO15226 690 aaKnown RBP eCLIP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 ARIH2O95376 493 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 PCNTO95613 3336 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 ZNF865P0CJ78 1059 aaPredicted RBP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 TXNP10599 105 aaKnown RBP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 SFNP31947 248 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 CYP2C19P33261 490 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 JAK3P52333 1124 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 EPHA7Q15375 998 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 SPECC1Q5M775 1068 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 KRT79Q5XKE5 535 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 NCAPH2Q6IBW4 605 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 CABP7Q86V35 215 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 SMAP1Q8IYB5 467 aaPredicted RBP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 NEK9Q8TD19 979 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 GPT2Q8TD30 523 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 PYM1Q9BRP8 204 aaKnown RBP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 MMTAG2Q9BU76 263 aaKnown RBP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 JPH1Q9HDC5 661 aaPredicted RBP15.3■□□□□ 0.04
PRPF18-201ENST00000320054 SLC9A2Q9UBY0 812 aa15.3■□□□□ 0.04
PRPF18-201ENST00000320054 PP2D1A8MPX8 630 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 WDR64B1ANS9 1081 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 EML1O00423 815 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 ADCY3O60266 1144 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 FARP2O94887 1054 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-201ENST00000320054 LIG1P18858 919 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 NDUFA8P51970 172 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 LY6KQ17RY6 165 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 CELF3Q5SZQ8 465 aaKnown RBP15.29■□□□□ 0.04
PRPF18-201ENST00000320054 HYIQ5T013 277 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 METTL7BQ6UX53 244 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 FMR1NBQ8N0W7 255 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-201ENST00000320054 KCTD17Q8N5Z5 321 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 RAET1EQ8TD07 263 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-201ENST00000320054 CCDC39Q9UFE4 941 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
PRPF18-201ENST00000320054 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 ARID2Q68CP9 1835 aa15.29■□□□□ 0.04
PRPF18-201ENST00000320054 KDM3AQ9Y4C1 1321 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 DDX39AO00148 427 aaKnown RBP15.28■□□□□ 0.04
PRPF18-201ENST00000320054 GGPS1O95749 300 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 CCNE2O96020 404 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 GH1P01241 217 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 MUTP22033 750 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms