RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 AGO4Q9HCK5 861 aaKnown RBP18.91■□□□□ 0.62
LRRC42-201ENST00000319223 ZMYND8Q9ULU4 1186 aaPredicted RBP18.91■□□□□ 0.62
LRRC42-201ENST00000319223 ARVCFO00192 962 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 MAFGO15525 162 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 PQBP1O60828 265 aaKnown RBP18.9■□□□□ 0.62
LRRC42-201ENST00000319223 MMP1P03956 469 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 ZNF286BP0CG31 522 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 SYN1P17600 705 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 ITGB3BPQ13352 177 aaPredicted RBP18.9■□□□□ 0.62
LRRC42-201ENST00000319223 DGKDQ16760 1214 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 SLC43A3Q8NBI5 491 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 TNFRSF25Q93038 417 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 LENG9Q96B70 501 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 CDHR1Q96JP9 859 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 GPR20Q99678 358 aa18.9■□□□□ 0.62
LRRC42-201ENST00000319223 BTBD18B2RXH4 712 aa18.89■□□□□ 0.61
LRRC42-201ENST00000319223 HOXD8P13378 290 aaPredicted RBP18.89■□□□□ 0.61
LRRC42-201ENST00000319223 HMGN5P82970 282 aaKnown RBP18.89■□□□□ 0.61
LRRC42-201ENST00000319223 INF2Q27J81 1249 aa18.89■□□□□ 0.61
LRRC42-201ENST00000319223 PRR16Q569H4 304 aa18.89■□□□□ 0.61
LRRC42-201ENST00000319223 NIPA1Q7RTP0 329 aa18.89■□□□□ 0.61
LRRC42-201ENST00000319223 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
LRRC42-201ENST00000319223 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.61
LRRC42-201ENST00000319223 KPNA6O60684 536 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 PPFIA4O75335 1185 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 TDP2O95551 362 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 KRT2P35908 639 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 USP11P51784 963 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 NONOQ15233 471 aaKnown RBP eCLIP18.88■□□□□ 0.61
LRRC42-201ENST00000319223 NBPF20Q3BBV1 942 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 PIK3AP1Q6ZUJ8 805 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 ANKRD33Q7Z3H0 272 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 C8orf76Q96K31 380 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 NR2E3Q9Y5X4 410 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 FAAP100Q0VG06 881 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 DIS3L2Q8IYB7 885 aaKnown RBP18.88■□□□□ 0.61
LRRC42-201ENST00000319223 FAM184AQ8NB25 1140 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 C16orf70Q9BSU1 422 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 SCN10AQ9Y5Y9 1956 aa18.88■□□□□ 0.61
LRRC42-201ENST00000319223 CCDC194A0A1B0GVG4 234 aa18.87■□□□□ 0.61
LRRC42-201ENST00000319223 GSTTP1A0A1W2PQM5 241 aa18.87■□□□□ 0.61
LRRC42-201ENST00000319223 NOP56O00567 594 aaKnown RBP18.87■□□□□ 0.61
LRRC42-201ENST00000319223 DHX15O43143 795 aaKnown RBP18.87■□□□□ 0.61
LRRC42-201ENST00000319223 TRIM29Q14134 588 aa18.87■□□□□ 0.61
LRRC42-201ENST00000319223 FAM126BQ8IXS8 530 aa18.87■□□□□ 0.61
LRRC42-201ENST00000319223 GIMAP8Q8ND71 665 aaPredicted RBP18.87■□□□□ 0.61
LRRC42-201ENST00000319223 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 F2P00734 622 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 TRIM50Q86XT4 487 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 FBXO18Q8NFZ0 1043 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 GJA10Q969M2 543 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 TRIM43Q96BQ3 446 aaPredicted RBP18.86■□□□□ 0.61
LRRC42-201ENST00000319223 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 PDLIM7Q9NR12 457 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 DDX39AO00148 427 aaKnown RBP18.86■□□□□ 0.61
LRRC42-201ENST00000319223 HAS3O00219 553 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 MSH4O15457 936 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 LGALS2P05162 132 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 PSEN2P49810 448 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 UTP14CQ5TAP6 766 aaKnown RBP18.86■□□□□ 0.61
LRRC42-201ENST00000319223 TOX2Q96NM4 488 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 ZNF577Q9BSK1 485 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 JPH1Q9HDC5 661 aaPredicted RBP18.86■□□□□ 0.61
LRRC42-201ENST00000319223 PRDM5Q9NQX1 630 aaPredicted RBP18.86■□□□□ 0.61
LRRC42-201ENST00000319223 SLC9A2Q9UBY0 812 aa18.86■□□□□ 0.61
LRRC42-201ENST00000319223 NFASCO94856 1347 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 CYP3A7-CYP3A51PA0A087WV96 503 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 IPO5O00410 1097 aaKnown RBP18.85■□□□□ 0.61
LRRC42-201ENST00000319223 WNT7AO00755 349 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 B4GALT4O60513 344 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 CCNE2O96020 404 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 CD4P01730 458 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 CYP3A7P24462 503 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 ITGB8P26012 769 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 GJB2P29033 226 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 TCF7P36402 384 aaPredicted RBP18.85■□□□□ 0.61
LRRC42-201ENST00000319223 CUL4AQ13619 759 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 MFSD10Q14728 455 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 LETM2Q2VYF4 491 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 MBOAT7Q96N66 472 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 SDF4Q9BRK5 362 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
LRRC42-201ENST00000319223 TRMT13Q9NUP7 481 aaKnown RBP18.85■□□□□ 0.61
LRRC42-201ENST00000319223 SLC37A4O43826 429 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 CLTBP09497 229 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 SETQ01105 290 aaPredicted RBP18.84■□□□□ 0.61
LRRC42-201ENST00000319223 KIAA0753Q2KHM9 967 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 Q4G0T1 1027 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 PRPF38BQ5VTL8 546 aaKnown RBP18.84■□□□□ 0.61
LRRC42-201ENST00000319223 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 SEPT1Q8WYJ6 367 aa18.84■□□□□ 0.61
LRRC42-201ENST00000319223 DCDC2CA8MYV0 355 aa18.83■□□□□ 0.61
LRRC42-201ENST00000319223 ACTR2P61160 394 aa18.83■□□□□ 0.61
LRRC42-201ENST00000319223 HIC1Q14526 733 aa18.83■□□□□ 0.61
LRRC42-201ENST00000319223 NFRKBQ6P4R8 1299 aa18.83■□□□□ 0.61
LRRC42-201ENST00000319223 PCYT2Q99447 389 aa18.83■□□□□ 0.61
LRRC42-201ENST00000319223 HDAC6Q9UBN7 1215 aa18.83■□□□□ 0.61
LRRC42-201ENST00000319223 MROH7Q68CQ1 1323 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms