RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 C16orf70Q9BSU1 422 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 BCAS3Q9H6U6 928 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 UBIAD1Q9Y5Z9 338 aa30.27■■■□□ 2.44
CDKN2A-201ENST00000304494 MAFGO15525 162 aa30.26■■■□□ 2.43
CDKN2A-201ENST00000304494 PRPF3O43395 683 aaKnown RBP30.26■■■□□ 2.43
CDKN2A-201ENST00000304494 GPR20Q99678 358 aa30.26■■■□□ 2.43
CDKN2A-201ENST00000304494 MTMR10Q9NXD2 777 aa30.26■■■□□ 2.43
CDKN2A-201ENST00000304494 H3BRB1 525 aa30.25■■■□□ 2.43
CDKN2A-201ENST00000304494 EIF5BO60841 1220 aaKnown RBP30.25■■■□□ 2.43
CDKN2A-201ENST00000304494 LGALS2P05162 132 aa30.25■■■□□ 2.43
CDKN2A-201ENST00000304494 TOB2Q14106 344 aaPredicted RBP30.25■■■□□ 2.43
CDKN2A-201ENST00000304494 TUT1Q9H6E5 874 aaKnown RBP30.25■■■□□ 2.43
CDKN2A-201ENST00000304494 JADE2Q9NQC1 790 aa30.25■■■□□ 2.43
CDKN2A-201ENST00000304494 CTAGE1Q96RT6 745 aa30.24■■■□□ 2.43
CDKN2A-201ENST00000304494 RNF26Q9BY78 433 aaPredicted RBP30.24■■■□□ 2.43
CDKN2A-201ENST00000304494 UPF3BQ9BZI7 483 aaKnown RBP30.24■■■□□ 2.43
CDKN2A-201ENST00000304494 ESYT2A0FGR8 921 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 IQCF3P0C7M6 154 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 KCNA2P16389 499 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 IFNAR1P17181 557 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 CLK2P49760 499 aaKnown RBP30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 CCT2P78371 535 aaKnown RBP30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 MCTP2Q6DN12 878 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 AFAP1L1Q8TED9 768 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 PHKBQ93100 1093 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 ANO3Q9BYT9 981 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 C6orf50Q9HD87 102 aa30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 ZNF215Q9UL58 517 aaPredicted RBP30.23■■■□□ 2.43
CDKN2A-201ENST00000304494 PTK7Q13308 1070 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 NTRK3Q16288 839 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 PKN1Q16512 942 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 OTOP2Q7RTS6 562 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 ZNF274Q96GC6 653 aaPredicted RBP30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 MXRA8Q9BRK3 442 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 ZMYND12Q9H0C1 365 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 PDRG1Q9NUG6 133 aa30.22■■■□□ 2.43
CDKN2A-201ENST00000304494 TMEM265A0A087WTH1 108 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 ATP9AO75110 1047 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 SP4Q02446 784 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 RBL2Q08999 1139 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 DEFB128Q7Z7B8 93 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 PGBD1Q96JS3 809 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 SLC26A6Q9BXS9 759 aa30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 NCOA5Q9HCD5 579 aaKnown RBP30.21■■■□□ 2.43
CDKN2A-201ENST00000304494 GNA11P29992 359 aa30.2■■■□□ 2.43
CDKN2A-201ENST00000304494 SREBF1P36956 1147 aa30.2■■■□□ 2.43
CDKN2A-201ENST00000304494 ANAPC15P60006 121 aa30.2■■■□□ 2.43
CDKN2A-201ENST00000304494 TMEM260Q9NX78 707 aa30.2■■■□□ 2.43
CDKN2A-201ENST00000304494 PARNO95453 639 aaKnown RBP30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 ACTN1P12814 892 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 SELPP16109 830 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 TRIM22Q8IYM9 498 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 CCDC148Q8NFR7 591 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 DHX38Q92620 1227 aaKnown RBP30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 FAM161BQ96MY7 647 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 KCNH7Q9NS40 1196 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 TANC1Q9C0D5 1861 aa30.19■■■□□ 2.42
CDKN2A-201ENST00000304494 C17orf102A2RUQ5 167 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 CPLX1O14810 134 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 SMIM10L2AP0DMW4 78 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 SMIM10L2BP0DMW5 78 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 DNAJB2P25686 324 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 TCF7P36402 384 aaPredicted RBP30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 CEP55Q53EZ4 464 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 UTP14CQ5TAP6 766 aaKnown RBP30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 LRRC8DQ7L1W4 858 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 REXO1Q8N1G1 1221 aaKnown RBP30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 BICD2Q8TD16 824 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 SEPT1Q8WYJ6 367 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 VWCEQ96DN2 955 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 CXXC1Q9P0U4 656 aaPredicted RBP30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 STXBP5LQ9Y2K9 1186 aa30.18■■■□□ 2.42
CDKN2A-201ENST00000304494 GNAT1P11488 350 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 CKBP12277 381 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 ARHGAP4P98171 946 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 JAKMIP3Q5VZ66 844 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 CPLX2Q6PUV4 134 aaKnown RBP30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 FTOQ9C0B1 505 aaKnown RBP eCLIP30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 SEMA6BQ9H3T3 888 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 PKD2L1Q9P0L9 805 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 TELO2Q9Y4R8 837 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 SLC4A7Q9Y6M7 1214 aa30.17■■■□□ 2.42
CDKN2A-201ENST00000304494 DOCK5Q9H7D0 1870 aa30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 ZBBXA8MT70 800 aa30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 HOXC8P31273 242 aa30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 ZNF76P36508 570 aa30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 ZNF200P98182 395 aaPredicted RBP30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 SSRP1Q08945 709 aaKnown RBP30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 TRIM50Q86XT4 487 aa30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 SDF4Q9BRK5 362 aa30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 JPH1Q9HDC5 661 aaPredicted RBP30.16■■■□□ 2.42
CDKN2A-201ENST00000304494 NIPA1Q7RTP0 329 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 SERINC5Q86VE9 423 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 CYP2W1Q8TAV3 490 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 ATP6V0A1Q93050 837 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 TIFAQ96CG3 184 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 GUCD1Q96NT3 240 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 SH3GLB2Q9NR46 395 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 NFASCO94856 1347 aa30.15■■■□□ 2.42
CDKN2A-201ENST00000304494 MEIS1O00470 390 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms