RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 FAM196AQ6ZSG2 479 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 NOX5Q96PH1 765 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 DDX4Q9NQI0 724 aaKnown RBP18.6■□□□□ 0.57
CHRNE-201ENST00000293780 SSU72P8A0A1W2PR75 194 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 GOLGA6CA6NDK9 693 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 GOLGA6DP0CG33 693 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 ARID5AQ03989 594 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 KCTD1Q719H9 257 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 FAM76AQ8TAV0 307 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 GOLGA6AQ9NYA3 693 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 STIM2Q9P246 746 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 KIAA1024Q9UPX6 916 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 BTAF1O14981 1849 aa18.6■□□□□ 0.57
CHRNE-201ENST00000293780 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 USP17L10C9JJH3 530 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 PAFAH1B1P43034 410 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 ZNF543Q08ER8 600 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 PROM2Q8N271 834 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 CEP72Q9P209 647 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 PCDHA12Q9UN75 941 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 PALMO75781 387 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 GTF2IP78347 998 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 SLC9C1Q4G0N8 1177 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 TBC1D16Q8TBP0 767 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 EHD4Q9H223 541 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 PACSIN2Q9UNF0 486 aaPredicted RBP18.59■□□□□ 0.57
CHRNE-201ENST00000293780 PCDHA2Q9Y5H9 948 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 MYH7BA7E2Y1 1941 aa18.59■□□□□ 0.57
CHRNE-201ENST00000293780 FTCDO95954 541 aa18.58■□□□□ 0.57
CHRNE-201ENST00000293780 TBC1D5Q92609 795 aa18.58■□□□□ 0.57
CHRNE-201ENST00000293780 EDEM3Q9BZQ6 932 aa18.58■□□□□ 0.57
CHRNE-201ENST00000293780 POTEB3A0JP26 581 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 POTECB2RU33 542 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L15C9J2P7 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L13C9JLJ4 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L11C9JVI0 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L18D6R9N7 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L22D6RA61 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L17D6RBQ6 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L19D6RCP7 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L20D6RJB6 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 RBAK-RBAKDNI3L0D1 243 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 ONECUT3O60422 494 aaPredicted RBP18.58■□□□□ 0.56
CHRNE-201ENST00000293780 PPFIA4O75335 1185 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 TTLL1O95922 423 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 KLRC1P26715 233 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L24Q0WX57 530 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 C8orf74Q6P047 294 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 USP17L6PQ6QN14 398 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 POTEBQ6S5H4 581 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 SLF2Q8IX21 1173 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 CUL5Q93034 780 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.58■□□□□ 0.56
CHRNE-201ENST00000293780 PACSIN1Q9BY11 444 aa18.58■□□□□ 0.56
CHRNE-201ENST00000293780 ZSCAN5CA6NGD5 496 aaPredicted RBP18.57■□□□□ 0.56
CHRNE-201ENST00000293780 C6orf229H3BNL8 230 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 SERPING1P05155 500 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 RNASE9P60153 205 aaKnown RBP18.57■□□□□ 0.56
CHRNE-201ENST00000293780 RNF10Q8N5U6 811 aaKnown RBP18.57■□□□□ 0.56
CHRNE-201ENST00000293780 ARL8AQ96BM9 186 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 RABEP2Q9H5N1 569 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 PLIN4Q96Q06 1357 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 RIMBP2O15034 1052 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 GLI1P08151 1106 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 PLA2G4BP0C869 781 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 STAT3P40763 770 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 EPHB4P54760 987 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 RAPGEF1Q13905 1077 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 HERC4Q5GLZ8 1057 aaPredicted RBP18.57■□□□□ 0.56
CHRNE-201ENST00000293780 SCFD1Q8WVM8 642 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 MXD3Q9BW11 206 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 PSTPIP2Q9H939 334 aa18.57■□□□□ 0.56
CHRNE-201ENST00000293780 A0A087X0T9 212 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 ESYT3A0FGR9 886 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 SHOX2O60902 331 aaPredicted RBP18.56■□□□□ 0.56
CHRNE-201ENST00000293780 FAM228BP0C875 321 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 TTC19Q6DKK2 380 aaPredicted RBP18.56■□□□□ 0.56
CHRNE-201ENST00000293780 GPBP1Q86WP2 473 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 TRIM59Q8IWR1 403 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 FAM133AQ8N9E0 248 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 BMP2KQ9NSY1 1161 aaPredicted RBP18.56■□□□□ 0.56
CHRNE-201ENST00000293780 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.56■□□□□ 0.56
CHRNE-201ENST00000293780 CARSP49589 748 aaKnown RBP18.56■□□□□ 0.56
CHRNE-201ENST00000293780 IRAK1P51617 712 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 MRPL12P52815 198 aaKnown RBP18.56■□□□□ 0.56
CHRNE-201ENST00000293780 CRY2Q49AN0 593 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 CFAP221Q4G0U5 840 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 SH3GL2Q99962 352 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 KCTD10Q9H3F6 313 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 ZHX3Q9H4I2 956 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 ADAMTS1Q9UHI8 967 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
CHRNE-201ENST00000293780 MPHOSPH10O00566 681 aaKnown RBP18.55■□□□□ 0.56
CHRNE-201ENST00000293780 FAM153BP0C7A2 387 aa18.55■□□□□ 0.56
CHRNE-201ENST00000293780 NAB2Q15742 525 aa18.55■□□□□ 0.56
CHRNE-201ENST00000293780 FAM153CQ494X1 144 aa18.55■□□□□ 0.56
CHRNE-201ENST00000293780 TTMPQ5BVD1 217 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms