RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 FOSP01100 380 aaPredicted RBP12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 SKILP12757 684 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 SREBF2Q12772 1141 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 SEMA3FQ13275 785 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 PPP4R3AQ6IN85 833 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 SYMPKQ92797 1274 aaKnown RBP12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 SRPRBQ9Y5M8 271 aaKnown RBP12.88□□□□□ -0.35
CHRNB3-201ENST00000289957 DNAJC25-GNG10A0A024R161 153 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 DDX39AO00148 427 aaKnown RBP12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 NR3C2P08235 984 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 OR52Z1P0C646 297 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 ZNF76P36508 570 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 USP11P51784 963 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 TRAF1Q13077 416 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 PTPN14Q15678 1187 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 HPSEQ9Y251 543 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 KIAA1217Q5T5P2 1943 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 RBAK-RBAKDNI3L0D1 243 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 SLC25A27O95847 323 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 CYP3A4P08684 503 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 FCER1AP12319 257 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 PFKFB1P16118 471 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 CYP3A7P24462 503 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 ALDH5A1P51649 535 aaPredicted RBP12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 TKFCQ3LXA3 575 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 CEP55Q53EZ4 464 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
CHRNB3-201ENST00000289957 ZSCAN20P17040 1043 aaPredicted RBP12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 CIITAP33076 1130 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 ITGB3BPQ13352 177 aaPredicted RBP12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 KCTD2Q14681 263 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 DPCR1Q3MIW9 517 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 PCNX4Q63HM2 1172 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 NPLOC4Q8TAT6 608 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 ERO1AQ96HE7 468 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 KCNH7Q9NS40 1196 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 OGFRQ9NZT2 677 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 MEIS1O00470 390 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 FOXN1O15353 648 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 CCP110O43303 1012 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 CA12O43570 354 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 CHMP2AO43633 222 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 NRDCO43847 1150 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 ZNF202O95125 648 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 INHBEP58166 350 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 SP2Q02086 613 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 NCAPHQ15003 741 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 ECM1Q16610 540 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 CCL14Q16627 93 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 RESP18Q5W5W9 173 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 VSIG10LQ86VR7 867 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 NSUN6Q8TEA1 469 aaKnown RBP12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 MXRA8Q9BRK3 442 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 MROH8Q9H579 483 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 ZFYVE28Q9HCC9 887 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 FLRT1Q9NZU1 646 aa12.86□□□□□ -0.35
CHRNB3-201ENST00000289957 PLXNA1Q9UIW2 1896 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 PFASO15067 1338 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 EML1O00423 815 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 CASP1P29466 404 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 SPIRE1Q08AE8 756 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 Q4G0T1 1027 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 FBXO16Q8IX29 292 aaPredicted RBP12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 ZNF397Q8NF99 534 aaPredicted RBP12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 PDGFCQ9NRA1 345 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 CEP131Q9UPN4 1083 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 UBIAD1Q9Y5Z9 338 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 CUTAO60888 179 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 GJC2Q5T442 439 aaPredicted RBP12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 DTHD1Q6ZMT9 781 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 SEPT14Q6ZU15 432 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 KIF18AQ8NI77 898 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 STAMQ92783 540 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 L2HGDHQ9H9P8 463 aa12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 MORC2Q9Y6X9 1032 aaPredicted RBP12.85□□□□□ -0.35
CHRNB3-201ENST00000289957 USP27XA6NNY8 438 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 ARIH2O95376 493 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 CCNA1P78396 465 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 SP4Q02446 784 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 MTMR1Q13613 665 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 GRB14Q14449 540 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 ARID5BQ14865 1188 aa12.84□□□□□ -0.35
CHRNB3-201ENST00000289957 ZNF792Q3KQV3 632 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms