RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
NSMCE2-201ENST00000287437 ZSCAN10Q96SZ4 725 aaPredicted RBP12.5□□□□□ -0.41
NSMCE2-201ENST00000287437 AMNQ9BXJ7 453 aa12.5□□□□□ -0.41
NSMCE2-201ENST00000287437 NSUN3Q9H649 340 aaKnown RBP12.5□□□□□ -0.41
NSMCE2-201ENST00000287437 CLDND1Q9NY35 253 aa12.5□□□□□ -0.41
NSMCE2-201ENST00000287437 MICAL3Q7RTP6 2002 aa12.5□□□□□ -0.41
NSMCE2-201ENST00000287437 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 TRIM6-TRIM34B2RNG4 842 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 H3BRB1 525 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 TREHO43280 583 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 SMIM10L2AP0DMW4 78 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 SMIM10L2BP0DMW5 78 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 HOXC8P31273 242 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 NHLH1Q02575 133 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 GHRHRQ02643 423 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 COL19A1Q14993 1142 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 PGM5Q15124 567 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 CCDC178Q5BJE1 867 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 VSIG10LQ86VR7 867 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 STAG2Q8N3U4 1231 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 IFIH1Q9BYX4 1025 aaKnown RBP12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 TUT1Q9H6E5 874 aaKnown RBP12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
NSMCE2-201ENST00000287437 LGALS2P05162 132 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 MFAP1P55081 439 aaKnown RBP12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 ADHFE1Q8IWW8 467 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 PRKAG3Q9UGI9 489 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 FAM50BQ9Y247 325 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
NSMCE2-201ENST00000287437 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 TGFB3P10600 412 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 SDSP20132 328 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 CTNNB1P35222 781 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 IRS1P35568 1242 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 LTBRP36941 435 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 CLUL1Q15846 466 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 HFE2Q6ZVN8 426 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 RPAINQ86UA6 219 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 SETD4Q9NVD3 440 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 C5orf42Q9H799 3197 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 MYH7BA7E2Y1 1941 aa12.47□□□□□ -0.41
NSMCE2-201ENST00000287437 KLRF2D3W0D1 207 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 NOP56O00567 594 aaKnown RBP12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 ZBTB5O15062 677 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 CAND2O75155 1236 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 CSPG5O95196 566 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 CCND2P30279 289 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 NT5C2P49902 561 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 DLX2Q07687 328 aaPredicted RBP12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 CWC27Q6UX04 472 aaKnown RBP12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 FCHSD1Q86WN1 690 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 TRIM50Q86XT4 487 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 FIBCD1Q8N539 461 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 MTMR8Q96EF0 704 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 IL17RAQ96F46 866 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 LNPKQ9C0E8 428 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 MAP3K20Q9NYL2 800 aaKnown RBP12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 MUTYHQ9UIF7 546 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 TELO2Q9Y4R8 837 aa12.46□□□□□ -0.41
NSMCE2-201ENST00000287437 LAMA4Q16363 1823 aa12.46□□□□□ -0.42
NSMCE2-201ENST00000287437 MYH6P13533 1939 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 GRM6O15303 877 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 LINC00271P0C7V0 271 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 HYAL1Q12794 435 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 SMAD2Q15796 467 aaKnown RBP12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 SLC35G1Q2M3R5 365 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 CTC1Q2NKJ3 1217 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 IFIT1BQ5T764 474 aaKnown RBP12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 APBB2Q92870 758 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 C11orf84Q9BUA3 381 aaPredicted RBP12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
NSMCE2-201ENST00000287437 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 ADGRA3Q8IWK6 1321 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 C5orf67F2Z3F1 127 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 GCOM1H8Y6P7 765 aaPredicted RBP12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 MBTPS2O43462 519 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 NCK2O43639 380 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 TBX10O75333 385 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 POLR2MP0CAP2 368 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 GHRP10912 638 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 GNAT1P11488 350 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 GTF2F1P35269 517 aaKnown RBP eCLIP12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 BMPR1AP36894 532 aa12.44□□□□□ -0.42
NSMCE2-201ENST00000287437 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms