RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 IL1R1P14778 569 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 HPDP32754 393 aaPredicted RBP12.52□□□□□ -0.4
SCLT1-201ENST00000281142 MAGEA1P43355 309 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 ASIC1P78348 528 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 IFT88Q13099 833 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 RPAINQ86UA6 219 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 STAG2Q8N3U4 1231 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 ZNF384Q8TF68 577 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 CENPHQ9H3R5 247 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 SLC39A2Q9NP94 309 aa12.52□□□□□ -0.4
SCLT1-201ENST00000281142 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
SCLT1-201ENST00000281142 NR1D1P20393 614 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 TRAPPC10P48553 1259 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 PTGISQ16647 500 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 PTPROQ16827 1216 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.41
SCLT1-201ENST00000281142 KIAA0895Q8NCT3 520 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 OR2W6PQ8NHA6 318 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 PYM1Q9BRP8 204 aaKnown RBP12.52□□□□□ -0.41
SCLT1-201ENST00000281142 KCNQ5Q9NR82 932 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 SIK3Q9Y2K2 1263 aa12.52□□□□□ -0.41
SCLT1-201ENST00000281142 FSBPO95073 299 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 PAFAH1B1P43034 410 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ACTN3Q08043 901 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-201ENST00000281142 PPP2R5AQ15172 486 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 B4GALNT4Q76KP1 1039 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 KRT12Q99456 494 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 EPN3Q9H201 632 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 NLRP14Q86W24 1093 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 MYCBPAPQ8TBZ2 947 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-201ENST00000281142 TRIM9Q9C026 710 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 A1CFQ9NQ94 594 aaKnown RBP12.51□□□□□ -0.41
SCLT1-201ENST00000281142 FLT1P17948 1338 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ECE2O60344 883 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 PPP1R37O75864 691 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 DDAH1O94760 285 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ITIH3Q06033 890 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ZSCAN29Q8IWY8 852 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-201ENST00000281142 ALS2CR12Q96Q35 445 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 PSME4Q14997 1843 aa12.51□□□□□ -0.41
SCLT1-201ENST00000281142 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 E7EVH7 732 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 PRLRP16471 622 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 CDK17Q00537 523 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 ENOX2Q16206 610 aaKnown RBP12.5□□□□□ -0.41
SCLT1-201ENST00000281142 EGFL6Q8IUX8 553 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 GLIS3Q8NEA6 775 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 CPVLQ9H3G5 476 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 NLRC4Q9NPP4 1024 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 GDF3Q9NR23 364 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
SCLT1-201ENST00000281142 CCDC194A0A1B0GVG4 234 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 SSBP05455 408 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCLT1-201ENST00000281142 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 MAATS1Q7Z4T9 603 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 DNAAF5Q86Y56 855 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 GIMAP7Q8NHV1 300 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
SCLT1-201ENST00000281142 A0A1W2PQJ5 194 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 YDJCA8MPS7 323 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 G3V3G9 751 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 CALM1P0DP23 149 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 CALM2P0DP24 149 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 CALM3P0DP25 149 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 CABP7Q86V35 215 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 KLHL7Q8IXQ5 586 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 IFT20Q8IY31 132 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 NOC3LQ8WTT2 800 aaKnown RBP12.49□□□□□ -0.41
SCLT1-201ENST00000281142 BAP1Q92560 729 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 NDST4Q9H3R1 872 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 GOLPH3Q9H4A6 298 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 MCM8Q9UJA3 840 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 PLAAQ9Y263 795 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 PALMO75781 387 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 HNRNPH3P31942 346 aaKnown RBP12.49□□□□□ -0.41
SCLT1-201ENST00000281142 ELF1P32519 619 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 MDH1P40925 334 aaKnown RBP12.49□□□□□ -0.41
SCLT1-201ENST00000281142 SETQ01105 290 aaPredicted RBP12.49□□□□□ -0.41
SCLT1-201ENST00000281142 QPCTQ16769 361 aa12.49□□□□□ -0.41
SCLT1-201ENST00000281142 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
SCLT1-201ENST00000281142 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
SCLT1-201ENST00000281142 MIEF2Q96C03 454 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms