RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 STXBP2Q15833 593 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 HSDL1Q3SXM5 330 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 TMEM67Q5HYA8 995 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 MICALL1Q8N3F8 863 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 IWS1Q96ST2 819 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 MAF1Q9H063 256 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 DIAPH3Q9NSV4 1193 aa10.44□□□□□ -0.74
TPM3-201ENST00000271850 RYDENQ9NUL5 291 aaKnown RBP10.44□□□□□ -0.74
TPM3-201ENST00000271850 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 CFBP00751 764 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 CYP21A2P08686 494 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 CKBP12277 381 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 UBA1P22314 1058 aaKnown RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 HOXA13P31271 388 aaPredicted RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 HOXC8P31273 242 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 NT5C2P49902 561 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 ANTXR2P58335 489 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 MRPS5P82675 430 aaKnown RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 SEMA3FQ13275 785 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 GRB10Q13322 594 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 MFSD10Q14728 455 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 PGM5Q15124 567 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 IMMTQ16891 758 aaKnown RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 PPP1R15BQ5SWA1 713 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 ARHGEF16Q5VV41 709 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 LRRC8DQ7L1W4 858 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 PPTC7Q8NI37 304 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 CAGE1Q8TC20 777 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 PHOSPHO2Q8TCD6 241 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 AFAP1L1Q8TED9 768 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 ARNTL2Q8WYA1 636 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 UHRF1Q96T88 793 aaPredicted RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 C16orf70Q9BSU1 422 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 ALG1Q9BT22 464 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 RIOX1Q9H6W3 641 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 MRPL11Q9Y3B7 192 aaKnown RBP10.43□□□□□ -0.74
TPM3-201ENST00000271850 MYH7BA7E2Y1 1941 aa10.43□□□□□ -0.74
TPM3-201ENST00000271850 FRMPD4Q14CM0 1322 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 KLRF2D3W0D1 207 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 ZBTB5O15062 677 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 BAIAP3O94812 1187 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 SELPP16109 830 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 TROAPQ12815 778 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 BFSP2Q13515 415 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 AAMPQ13685 434 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 GRM4Q14833 912 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 DGKDQ16760 1214 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 KIAA0753Q2KHM9 967 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 BRDTQ58F21 947 aaPredicted RBP10.42□□□□□ -0.74
TPM3-201ENST00000271850 CCDC178Q5BJE1 867 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 IFIT1BQ5T764 474 aaKnown RBP10.42□□□□□ -0.74
TPM3-201ENST00000271850 ZNF618Q5T7W0 954 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 TTC22Q5TAA0 569 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 VSIG10LQ86VR7 867 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 MCF2L2Q86YR7 1114 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 RETREG2Q8NC44 543 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 GDPD5Q8WTR4 605 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
TPM3-201ENST00000271850 PIGSQ96S52 555 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 AMNQ9BXJ7 453 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 KRT23Q9C075 422 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 FTOQ9C0B1 505 aaKnown RBP eCLIP10.42□□□□□ -0.747e-6■■□□□ 12.9
TPM3-201ENST00000271850 MRVI1Q9Y6F6 885 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
TPM3-201ENST00000271850 ACTN1P12814 892 aa10.41□□□□□ -0.74
TPM3-201ENST00000271850 CASTP20810 708 aaKnown RBP10.41□□□□□ -0.74
TPM3-201ENST00000271850 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
TPM3-201ENST00000271850 CELF3Q5SZQ8 465 aaKnown RBP10.41□□□□□ -0.74
TPM3-201ENST00000271850 CNKSR3Q6P9H4 555 aa10.41□□□□□ -0.74
TPM3-201ENST00000271850 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.41□□□□□ -0.744e-6■□□□□ 9.7
TPM3-201ENST00000271850 Q6ZNB5 142 aa10.41□□□□□ -0.74
TPM3-201ENST00000271850 MPHOSPH6Q99547 160 aaKnown RBP10.41□□□□□ -0.74
TPM3-201ENST00000271850 UBAC1Q9BSL1 405 aa10.41□□□□□ -0.74
TPM3-201ENST00000271850 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
TPM3-201ENST00000271850 PCDHA1Q9Y5I3 950 aa10.41□□□□□ -0.74
TPM3-201ENST00000271850 MICAL3Q7RTP6 2002 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 B4DLN1 442 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 HIP1O00291 1037 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 TLL1O43897 1013 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 DHX16O60231 1041 aaKnown RBP10.4□□□□□ -0.74
TPM3-201ENST00000271850 GJB5O95377 273 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 GGPS1O95749 300 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 MYCLP12524 364 aaPredicted RBP10.4□□□□□ -0.74
TPM3-201ENST00000271850 COL9A1P20849 921 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 CHMLP26374 656 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 MRPL12P52815 198 aaKnown RBP10.4□□□□□ -0.74
TPM3-201ENST00000271850 PTK7Q13308 1070 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 LAMC2Q13753 1193 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 SERINC5Q86VE9 423 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 CTNNA3Q9UI47 895 aa10.4□□□□□ -0.74
TPM3-201ENST00000271850 SIP14410 1827 aa10.4□□□□□ -0.75
TPM3-201ENST00000271850 COL4A6Q14031 1691 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 LINC01553A4QN01 128 aa10.39□□□□□ -0.75
TPM3-201ENST00000271850 E7EWF7 191 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms