RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 SLC26A4O43511 780 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 RNF40O75150 1001 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 ZMYND10O75800 440 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 PRELPP51888 382 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 RASSF7Q02833 373 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 DPP8Q6V1X1 898 aaPredicted RBP13.77□□□□□ -0.21
BEST3-201ENST00000266661 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 MYOCDQ8IZQ8 938 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 SPATA4Q8NEY3 305 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 CCDC102AQ96A19 550 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 CDK5RAP3Q96JB5 506 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 CEP63Q96MT8 703 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 TLR10Q9BXR5 811 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 FGFBP2Q9BYJ0 223 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 GPCPD1Q9NPB8 672 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 JADE2Q9NQC1 790 aa13.77□□□□□ -0.21
BEST3-201ENST00000266661 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 TTLL1O95922 423 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 GCFC2P16383 781 aaKnown RBP13.76□□□□□ -0.21
BEST3-201ENST00000266661 TCP1P17987 556 aaKnown RBP13.76□□□□□ -0.21
BEST3-201ENST00000266661 MAGEA1P43355 309 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 FKBP3Q00688 224 aaKnown RBP13.76□□□□□ -0.21
BEST3-201ENST00000266661 HSP90B2PQ58FF3 399 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 KLHDC7AQ5VTJ3 777 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 IQCEQ6IPM2 695 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 DPY19L2P1Q6NXN4 242 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
BEST3-201ENST00000266661 HDAC7Q8WUI4 952 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 KCTD10Q9H3F6 313 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 DDX25Q9UHL0 483 aaKnown RBP13.76□□□□□ -0.21
BEST3-201ENST00000266661 DMGDHQ9UI17 866 aaKnown RBP13.76□□□□□ -0.21
BEST3-201ENST00000266661 HYOU1Q9Y4L1 999 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 COL4A3BPQ9Y5P4 624 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 CYP3A7-CYP3A51PA0A087WV96 503 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 CYP3A7P24462 503 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 TNFRSF8P28908 595 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 TNNI2P48788 182 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 FAM26FQ5R3K3 315 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 LRRC31Q6UY01 552 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 TSG101Q99816 390 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 LRRC1Q9BTT6 524 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 KCNMB3Q9NPA1 279 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 CEP72Q9P209 647 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 FAM184BQ9ULE4 1060 aa13.76□□□□□ -0.21
BEST3-201ENST00000266661 ZBTB5O15062 677 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 AKR1B10O60218 316 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 GTF2IP78347 998 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 GPATCH4Q5T3I0 446 aaKnown RBP13.75□□□□□ -0.21
BEST3-201ENST00000266661 NFRKBQ6P4R8 1299 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 GSPT2Q8IYD1 628 aaKnown RBP13.75□□□□□ -0.21
BEST3-201ENST00000266661 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 CRYGNQ8WXF5 182 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 CUL5Q93034 780 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 PANK4Q9NVE7 773 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
BEST3-201ENST00000266661 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 USP17L10C9JJH3 530 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 NFKBIEO00221 500 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 PHACTR2O75167 634 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 GGCXP38435 758 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 SLC1A4P43007 532 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 MRPL12P52815 198 aaKnown RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 GFPT1Q06210 699 aaPredicted RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 GJA10Q969M2 543 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 SH3GL2Q99962 352 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 COA1Q9GZY4 146 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 PCDHA12Q9UN75 941 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 MYH7BA7E2Y1 1941 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 E9PMD0 336 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 SHOX2O60902 331 aaPredicted RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 SERPING1P05155 500 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 CYP11B2P19099 503 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 TNNT3P45378 269 aaPredicted RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 ARSHQ5FYA8 562 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 FOXR1Q6PIV2 292 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 SP8Q8IXZ3 490 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 SCFD1Q8WVM8 642 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 NAP1L4Q99733 375 aaKnown RBP13.74□□□□□ -0.21
BEST3-201ENST00000266661 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 GANQ9H2C0 597 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
BEST3-201ENST00000266661 KDM3AQ9Y4C1 1321 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms