RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 SND1Q7KZF4 910 aaKnown RBP eCLIP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 FAM81BQ96LP2 452 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 RHOXF2Q9BQY4 288 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 PLSCR1O15162 318 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 CFAP58Q5T655 872 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 EPSTI1Q96J88 318 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 PPP1R16BQ96T49 567 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 NSFP46459 744 aaKnown RBP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 ADKP55263 362 aaKnown RBP13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 LONRF3Q496Y0 759 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 RAET1EQ8TD07 263 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
ZKSCAN3-201ENST00000252211 TLDC2A0PJX2 215 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CLIC2O15247 247 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 H2AFZP0C0S5 128 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 C8orf74Q6P047 294 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 H2AFVQ71UI9 128 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PCIF1Q9H4Z3 704 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 GJB4Q9NTQ9 266 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PEX3P56589 373 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 TSGA10IPQ3SY00 556 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 KMT5BQ4FZB7 885 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 SCYL2Q6P3W7 929 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 TMEM39BQ9GZU3 492 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 VCPKMTQ9H867 229 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 STAM2O75886 525 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ZBTB33Q86T24 672 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ASIC3Q9UHC3 531 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 FEZ2Q9UHY8 353 aaPredicted RBP13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 AMFRQ9UKV5 643 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
ZKSCAN3-201ENST00000252211 IPO5O00410 1097 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 RNF8O76064 485 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PTPREP23469 700 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 TTLL3Q9Y4R7 772 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PCDHB4Q9Y5E5 795 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 RGL2O15211 777 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CCNE1P24864 410 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CDC27P30260 824 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 OSTNP61366 133 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 C16orf86Q6ZW13 317 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MICALCLQ6ZW33 695 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 GTF3C2Q8WUA4 911 aaPredicted RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 RPF1Q9H9Y2 349 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 BCL9O00512 1426 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MXI1P50539 228 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MAPK6Q16659 721 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 KCNV1Q6PIU1 500 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PPP1R21Q6ZMI0 780 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PSPC1Q8WXF1 523 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 POLLQ9UGP5 575 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 POTEMA6NI47 508 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CTNND1O60716 968 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CELF2O95319 508 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 QARSP47897 775 aaKnown RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 SMYD4Q8IYR2 804 aaPredicted RBP13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 C7orf31Q8N865 590 aa13.32□□□□□ -0.28
ZKSCAN3-201ENST00000252211 DYNC1I1O14576 645 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 P4HBP07237 508 aaKnown RBP13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PHKA2P46019 1235 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MMP14P50281 582 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 USP11P51784 963 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PPP4CP60510 307 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 MSTO1Q9BUK6 570 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ZNF302Q9NR11 478 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 BZW2Q9Y6E2 419 aaKnown RBP13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CETPP11597 493 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 PDZD4Q76G19 769 aaPredicted RBP13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 STAG2Q8N3U4 1231 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 NXF1Q9UBU9 619 aaKnown RBP13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 ZNF233A6NK53 670 aa13.31□□□□□ -0.28
ZKSCAN3-201ENST00000252211 DDIT3P35638 169 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms