RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 PVALEFA0A1B0GWK0 134 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 ESYT2A0FGR8 921 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CLIC2O15247 247 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 HLA-DOAP06340 250 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CAPN2P17655 700 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 ADAM9Q13443 819 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 PDIA5Q14554 519 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 ZYXQ15942 572 aaKnown RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 ARSHQ5FYA8 562 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CREG2Q8IUH2 290 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 SIAH1Q8IUQ4 282 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 CCDC170Q8IYT3 715 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 FAM133AQ8N9E0 248 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 HNRNPLLQ8WVV9 542 aaKnown RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 COA1Q9GZY4 146 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
SYDE2-201ENST00000234668 MAGEF1Q9HAY2 307 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 ADAMTS1Q9UHI8 967 aa10.12□□□□□ -0.79
SYDE2-201ENST00000234668 ESYT3A0FGR9 886 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 ZSCAN5CA6NGD5 496 aaPredicted RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 CHMP2AO43633 222 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 USO1O60763 962 aaKnown RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 NOL4O94818 638 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 HOXA10P31260 410 aaPredicted RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 TMEM119Q4V9L6 283 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 HSP90B2PQ58FF3 399 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 DNAJC21Q5F1R6 531 aaKnown RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 FAM83BQ5T0W9 1011 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 RETREG2Q8NC44 543 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 SCFD1Q8WVM8 642 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 TSG101Q99816 390 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 ANO3Q9BYT9 981 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 BMP2KQ9NSY1 1161 aaPredicted RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 COL4A3BPQ9Y5P4 624 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 RGL2O15211 777 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 TACC1O75410 805 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 SLC9A1P19634 815 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 NOVP48745 357 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 FKBP3Q00688 224 aaKnown RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 TCERG1LQ5VWI1 586 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 TTC19Q6DKK2 380 aaPredicted RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 CATSPER3Q86XQ3 398 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 CRAMP1Q96RY5 1269 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 SH2D4AQ9H788 454 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 QTRT2Q9H974 415 aaKnown RBP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 EMILIN3Q9NT22 766 aa10.11□□□□□ -0.79
SYDE2-201ENST00000234668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.11□□□□□ -0.79
SYDE2-201ENST00000234668 CCDC66A2RUB6 948 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 FAM86B1E9PN63 330 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 F5H6K3 240 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 MMP10P09238 476 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 FAM86B2P0C5J1 330 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 CYP11B2P19099 503 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 GGCXP38435 758 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 KLRC3Q07444 240 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 TUBB2AQ13885 445 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 RRP1BQ14684 758 aaKnown RBP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 TRADDQ15628 312 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 ZSCAN26Q16670 478 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 DCAF17Q5H9S7 520 aaPredicted RBP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 COL23A1Q86Y22 540 aaPredicted RBP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 TUBB2BQ9BVA1 445 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 FAM204AQ9H8W3 233 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 SNX12Q9UMY4 172 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 MYH1P12882 1939 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 A0A0U1RQG5 324 aaPredicted RBP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 MEIS2O14770 477 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 MYBP10242 640 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 CHRNA5P30532 468 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 HGSNATQ68CP4 663 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 PPP4R3AQ6IN85 833 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 PDXDC1Q6P996 788 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 CCDC84Q86UT8 332 aaPredicted RBP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 OSBPL9Q96SU4 736 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.1□□□□□ -0.79
SYDE2-201ENST00000234668 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 LCMT1Q9UIC8 334 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 NAV1Q8NEY1 1877 aa10.1□□□□□ -0.79
SYDE2-201ENST00000234668 A0A087X0T9 212 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 SYF2O95926 243 aaKnown RBP10.09□□□□□ -0.79
SYDE2-201ENST00000234668 GH2P01242 217 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 FAM228BP0C875 321 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 KLRC1P26715 233 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 EPS15P42566 896 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 CASP4P49662 377 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 ARHGAP4P98171 946 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 EHHADHQ08426 723 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 GPS2Q13227 327 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 PLS1Q14651 629 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 CCDC181Q5TID7 509 aa10.09□□□□□ -0.79
SYDE2-201ENST00000234668 SPATA4Q8NEY3 305 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms