RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GPBP1Q86WP2 473 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 MMS19Q96T76 1030 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 SYNPO2Q9UMS6 1093 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 ATAD5Q96QE3 1844 aa24.32■■□□□ 1.48
SMARCD2-201ENST00000225742 LRRC53A6NM62 1247 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 EPHB6O15197 1021 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 AKR1B10O60218 316 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 ITIH3Q06033 890 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 EDRF1Q3B7T1 1238 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 CACNA2D4Q7Z3S7 1137 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 COL23A1Q86Y22 540 aaPredicted RBP24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 KCTD17Q8N5Z5 321 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 AKT1S1Q96B36 256 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 FAM198AQ9UFP1 575 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 SERPINA10Q9UK55 444 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 TFR2Q9UP52 801 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 E9PMD0 336 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 MEIS2O14770 477 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 SSBP05455 408 aaKnown RBP eCLIP24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 CYP11B2P19099 503 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 DACT2Q5SW24 774 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 ZNF572Q7Z3I7 529 aaPredicted RBP24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 RUBCNQ92622 972 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 ALS2CR12Q96Q35 445 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 VIPAS39Q9H9C1 493 aa24.31■■□□□ 1.48
SMARCD2-201ENST00000225742 COL2A1P02458 1487 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 ARHGAP4P98171 946 aa24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 ICA1Q05084 483 aa24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 KCNMA1Q12791 1236 aa24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 ASTE1Q2TB18 679 aaPredicted RBP24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 FAM20AQ96MK3 541 aa24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 TANGO6Q9C0B7 1094 aa24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 PSD3Q9NYI0 1048 aa24.3■■□□□ 1.48
SMARCD2-201ENST00000225742 ZNF646O15015 1829 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 MACROD2A1Z1Q3 448 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 DDTLA6NHG4 134 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 RBAK-RBAKDNI3L0D1 243 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 PLEKP08567 350 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 HERC4Q5GLZ8 1057 aaPredicted RBP24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 STYK1Q6J9G0 422 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 TRIM59Q8IWR1 403 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 RNF10Q8N5U6 811 aaKnown RBP24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 CCDC155Q8N6L0 562 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 GLIS3Q8NEA6 775 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 ETNPPLQ8TBG4 499 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 CAGE1Q8TC20 777 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 LUC7LQ9NQ29 371 aaKnown RBP24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 SNX12Q9UMY4 172 aa24.29■■□□□ 1.48
SMARCD2-201ENST00000225742 POTEB3A0JP26 581 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 POTECB2RU33 542 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 MAGEA1P43355 309 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 SLC12A3P55017 1021 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 TRAF1Q13077 416 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 CASP8Q14790 479 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 CCDC70Q6NSX1 233 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 POTEBQ6S5H4 581 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 FBXO11Q86XK2 927 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 SIAH1Q8IUQ4 282 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 KCTD10Q9H3F6 313 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 DBNDD1Q9H9R9 158 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 EMILIN3Q9NT22 766 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 ENTPD3O75355 529 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 CIITAP33076 1130 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 SREBF1P36956 1147 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 ABCB5Q2M3G0 1257 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 SLC9C1Q4G0N8 1177 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 BTNL9Q6UXG8 535 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 KRT26Q7Z3Y9 468 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 EXOC4Q96A65 974 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 DUSP10Q9Y6W6 482 aa24.28■■□□□ 1.48
SMARCD2-201ENST00000225742 ATRNL1Q5VV63 1379 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 F5H6K3 240 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 PLSCR1O15162 318 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 SRGAP2O75044 1071 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 MED24O75448 989 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 SERPING1P05155 500 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 KRT18P05783 430 aaKnown RBP24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 MMP10P09238 476 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 TCP1P17987 556 aaKnown RBP24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 KLRC3Q07444 240 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 TCP10Q12799 353 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 SYDE2Q5VT97 1194 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 SFMBT2Q5VUG0 894 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 SH3BP5LQ7L8J4 393 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 KIAA0825Q8IV33 1275 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 MMGT1Q8N4V1 131 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 SCFD1Q8WVM8 642 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 GJA10Q969M2 543 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 JADE2Q9NQC1 790 aa24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.27■■□□□ 1.48
SMARCD2-201ENST00000225742 RPA1P27694 616 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 SPIRE1Q08AE8 756 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 PDE11AQ9HCR9 933 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 TSKSQ9UJT2 592 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 DNM3Q9UQ16 869 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 SPDYE3A6NKU9 549 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 H3BQF6 201 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 CETN3O15182 167 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 ECE2O60344 883 aa24.26■■□□□ 1.47
SMARCD2-201ENST00000225742 RBM5P52756 815 aaKnown RBP eCLIP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms