RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 NEDD9Q14511 834 aa16.38■□□□□ 0.21
SUPT4H1-201ENST00000225504 NIPA1Q7RTP0 329 aa16.38■□□□□ 0.21
SUPT4H1-201ENST00000225504 GJA10Q969M2 543 aa16.38■□□□□ 0.21
SUPT4H1-201ENST00000225504 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
SUPT4H1-201ENST00000225504 PCDH10Q9P2E7 1040 aa16.38■□□□□ 0.21
SUPT4H1-201ENST00000225504 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.38■□□□□ 0.21
SUPT4H1-201ENST00000225504 KIF28PB7ZC32 967 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 WNT7AO00755 349 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 METTL7BQ6UX53 244 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 PPTC7Q8NI37 304 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 DPF3Q92784 378 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
SUPT4H1-201ENST00000225504 CYP3A7-CYP3A51PA0A087WV96 503 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 ZEB2O60315 1214 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 CYP3A7P24462 503 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 KAT2BQ92831 832 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 GLT1D1Q96MS3 346 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 MBOAT7Q96N66 472 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 GPR20Q99678 358 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 BRMS1Q9HCU9 246 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
SUPT4H1-201ENST00000225504 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 MSH4O15457 936 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 HOXD8P13378 290 aaPredicted RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 TRIM60Q495X7 471 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 BRDTQ58F21 947 aaPredicted RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 NEK8Q86SG6 692 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 ZNF577Q9BSK1 485 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 ELP1O95163 1332 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 DDX39AO00148 427 aaKnown RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 SLC37A4O43826 429 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 KPNA6O60684 536 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 PPFIA4O75335 1185 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 CCNE2O96020 404 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 ZNF286BP0CG31 522 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 CDK7P50613 346 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 RTP1P59025 263 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 CHMP4BP1P59074 171 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 ITGA7Q13683 1181 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 SNX17Q15036 470 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 DGKDQ16760 1214 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 Q4G0T1 1027 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 LARP1BQ659C4 914 aaKnown RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 C16orf70Q9BSU1 422 aa16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 MTG1Q9BT17 334 aaPredicted RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
SUPT4H1-201ENST00000225504 ATP2B1P20020 1258 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 TLE2Q04725 743 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 NBPF20Q3BBV1 942 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 UTP14CQ5TAP6 766 aaKnown RBP16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 HSCBQ8IWL3 235 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 SLC9A2Q9UBY0 812 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 DDX25Q9UHL0 483 aaKnown RBP16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 ATP11BQ9Y2G3 1177 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 NFASCO94856 1347 aa16.34■□□□□ 0.21
SUPT4H1-201ENST00000225504 ARVCFO00192 962 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 EVI5O60447 810 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 CCNT1O60563 726 aaKnown RBP16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 CABYRO75952 493 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.23e-7■■■□□ 15.3
SUPT4H1-201ENST00000225504 C1orf53Q5VUE5 145 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 TRIM50Q86XT4 487 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 C7orf61Q8IZ16 206 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 SEPT1Q8WYJ6 367 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 SDF4Q9BRK5 362 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 JPH1Q9HDC5 661 aaPredicted RBP16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 KIF3AQ9Y496 699 aa16.33■□□□□ 0.2
SUPT4H1-201ENST00000225504 A0A0U1RQG5 324 aaPredicted RBP16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 LGALS2P05162 132 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 ACTR2P61160 394 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 SETQ01105 290 aaPredicted RBP16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 PPP4R3AQ6IN85 833 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 NOSTRINQ8IVI9 506 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 PCYT2Q99447 389 aa16.32■□□□□ 0.2
SUPT4H1-201ENST00000225504 H3BQV1 296 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 HAS3O00219 553 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 PSEN2P49810 448 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 TOB1P50616 345 aaPredicted RBP16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 HAS1Q92839 578 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 TBC1D22BQ9NU19 505 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms