RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MAP3K14Q99558 947 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 RNF216Q9NWF9 866 aaPredicted RBP10.35□□□□□ -0.75
CCDC113-201ENST00000219299 AKT3Q9Y243 479 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 PP2D1A8MPX8 630 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 LIG4P49917 911 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 LRRC41Q15345 812 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 SPATA24Q86W54 205 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 FAM20AQ96MK3 541 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 CACNA1FO60840 1977 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 ZNF541Q9H0D2 1346 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 COBLO75128 1261 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 PLA2G4BP0C869 781 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 GPRC5AQ8NFJ5 357 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 FAM76AQ8TAV0 307 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 PHF20Q9BVI0 1012 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 CUEDC2Q9H467 287 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 SYNCQ9H7C4 482 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 NHSL1Q5SYE7 1610 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 GLTPD2A6NH11 291 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 STXBP3O00186 592 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 NR3C2P08235 984 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 FANCCQ00597 558 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 MOB2Q70IA6 237 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 FBF1Q8TES7 1133 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 RSRC1Q96IZ7 334 aaKnown RBP10.35□□□□□ -0.75
CCDC113-201ENST00000219299 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 TBC1D22BQ9NU19 505 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 STK17AQ9UEE5 414 aa10.35□□□□□ -0.75
CCDC113-201ENST00000219299 A0A1B0GUA9 196 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 KLRG2A4D1S0 409 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-201ENST00000219299 WDR64B1ANS9 1081 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 TNNI1P19237 187 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 USP11P51784 963 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 GTF2A2P52657 109 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 EVCP57679 992 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 RPS6P62753 249 aaKnown RBP10.34□□□□□ -0.75
CCDC113-201ENST00000219299 TRPC3Q13507 836 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC127Q96BQ5 260 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC114Q96M63 670 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 ZFYVE28Q9HCC9 887 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 DISC1Q9NRI5 854 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-201ENST00000219299 TACC1O75410 805 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 STAMBPO95630 424 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 COPB2P35606 906 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 GSDMAQ96QA5 445 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 HNRNPDLO14979 420 aaKnown RBP10.34□□□□□ -0.75
CCDC113-201ENST00000219299 TTLL4Q14679 1199 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 WDR44Q5JSH3 913 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 BANK1Q8NDB2 785 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC42Q96M95 316 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 FAM49AQ9H0Q0 323 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-201ENST00000219299 MACROD2A1Z1Q3 448 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 SFI1A8K8P3 1242 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 KRT19P08727 400 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 KRT83P78385 493 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 NEDD9Q14511 834 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 CCDC6Q16204 474 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 PPM1EQ8WY54 764 aa10.34□□□□□ -0.75
CCDC113-201ENST00000219299 ZNF215Q9UL58 517 aaPredicted RBP10.34□□□□□ -0.75
CCDC113-201ENST00000219299 HOXD10P28358 340 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 TUBB2AQ13885 445 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 B4GALNT4Q76KP1 1039 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 CEP63Q96MT8 703 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 ADPGKQ9BRR6 497 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 TUBB2BQ9BVA1 445 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 ANKFY1Q9P2R3 1169 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 POTECB2RU33 542 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 KIF4AO95239 1232 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 CASP1P29466 404 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 ARMCX5Q6P1M9 558 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 IGSF22Q8N9C0 903 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 JPH2Q9BR39 696 aaPredicted RBP10.33□□□□□ -0.76
CCDC113-201ENST00000219299 ZMYND12Q9H0C1 365 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 MAGEF1Q9HAY2 307 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 FSD2A1L4K1 749 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 A6NNZ2 444 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 KRT86O43790 486 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 TXNP10599 105 aaKnown RBP10.33□□□□□ -0.76
CCDC113-201ENST00000219299 SMARCA1P28370 1054 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 KRT76Q01546 638 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 PPP2R3AQ06190 1150 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 TUBB8Q3ZCM7 444 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 SWSAP1Q6NVH7 229 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 HOOK3Q86VS8 718 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 TTC16Q8NEE8 873 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 FERMT1Q9BQL6 677 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 STMN4Q9H169 189 aaPredicted RBP10.33□□□□□ -0.76
CCDC113-201ENST00000219299 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 RAET1EQ8TD07 263 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 DDX12PQ92771 950 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 GMCL1Q96IK5 515 aa10.33□□□□□ -0.76
CCDC113-201ENST00000219299 ASB14A6NK59 587 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms