RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ASCC2Q9H1I8 757 aaPredicted RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 TRIP13Q15645 432 aaPredicted RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 TBC1D10BQ4KMP7 808 aaPredicted RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 HSPH1Q92598 858 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 TMEM245Q9H330 911 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ECEL1O95672 775 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ZNF18P17022 549 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 MED21Q13503 144 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 TAF1BQ53T94 588 aaPredicted RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 ACTR5Q9H9F9 607 aaPredicted RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 SERTAD1Q9UHV2 236 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 MAST3O60307 1309 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 PI4K2BG5E9Z4 385 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 EPHB4P54760 987 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 PLEKHM2Q8IWE5 1019 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 USE1Q9NZ43 259 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 KIAA1468Q9P260 1216 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 TIMM10P62072 90 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 OTUD7BQ6GQQ9 843 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 SH3GL2Q99962 352 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 PSTPIP2Q9H939 334 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 SELENONQ9NZV5 590 aa15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 PPARGC1AQ9UBK2 798 aaKnown RBP15.72■□□□□ 0.11
SPTLC2-201ENST00000216484 EFTUD2Q15029 972 aaKnown RBP eCLIP15.71■□□□□ 0.112e-8■■■■■ 46.9
SPTLC2-201ENST00000216484 CMTR1Q8N1G2 835 aaKnown RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 PI4K2BQ8TCG2 481 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 RNF139Q8WU17 664 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 CSADQ9Y600 493 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 SRGAP2CP0DJJ0 459 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 GOLGA8DPQ0D2H9 430 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 NEK8Q86SG6 692 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 TSR3Q9UJK0 312 aaKnown RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 KRT1P04264 644 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 RBBP7Q16576 425 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 PPP6R3Q5H9R7 873 aaPredicted RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 CEP85Q6P2H3 762 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 SYT2Q8N9I0 419 aaPredicted RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 TESK2Q96S53 571 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 FSD1LQ9BXM9 530 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 ADNPQ9H2P0 1102 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 APOBEC2Q9Y235 224 aaKnown RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 THRAP3Q9Y2W1 955 aaKnown RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 H0YCG3 227 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 ITGA6P23229 1130 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 PDCD6IPQ8WUM4 868 aaKnown RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 C6orf203Q9P0P8 240 aaPredicted RBP15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 GOLGA8SH3BPF8 625 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 MFAP3P55082 362 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 BTNL9Q6UXG8 535 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 S100A5P33763 92 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 DDB1Q16531 1140 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 NDEL1Q9GZM8 345 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 CLCA2Q9UQC9 943 aa15.71■□□□□ 0.11
SPTLC2-201ENST00000216484 FGD5Q6ZNL6 1462 aa15.71■□□□□ 0.1
SPTLC2-201ENST00000216484 GNPATO15228 680 aa15.71■□□□□ 0.1
SPTLC2-201ENST00000216484 SEC31AO94979 1220 aaKnown RBP15.71■□□□□ 0.1
SPTLC2-201ENST00000216484 ZNF215Q9UL58 517 aaPredicted RBP15.71■□□□□ 0.1
SPTLC2-201ENST00000216484 RALGAPBQ86X10 1494 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 RAPGEF3O95398 923 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 ARPP19P56211 112 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 TMPRSS15P98073 1019 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 PLD3Q8IV08 490 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 TTC17Q96AE7 1141 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 RUBCNLQ9H714 662 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 H7C1D1 291 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 PRPF4O43172 522 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 ARHGAP45Q92619 1136 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 ZMYND12Q9H0C1 365 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 MRPL40Q9NQ50 206 aaKnown RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 EIF4E1BA6NMX2 242 aaKnown RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 BPIFB4P59827 614 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 RAB14P61106 215 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 ARHGEF3Q9NR81 526 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 CHGBP05060 677 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 H2AFZP0C0S5 128 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 H2AFVQ71UI9 128 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 TRIM11Q96F44 468 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 SARS2Q9NP81 518 aaKnown RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 HNRNPDLO14979 420 aaKnown RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 MED7O43513 233 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 DIAPH2O60879 1101 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 SEC24DO94855 1032 aaPredicted RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 GJA10Q969M2 543 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 PITPNM3Q9BZ71 974 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 DYNC1I2Q13409 638 aaKnown RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 LBRQ14739 615 aaKnown RBP15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 LRFN2Q9ULH4 789 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 SESN1Q9Y6P5 492 aa15.7■□□□□ 0.1
SPTLC2-201ENST00000216484 GUCA1CO95843 209 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 CNGA3Q16281 694 aa15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 RNF219Q5W0B1 726 aaPredicted RBP15.69■□□□□ 0.1
SPTLC2-201ENST00000216484 KCNV2Q8TDN2 545 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms