RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Ddx3xQ62167 662 aaKnown RBP12.65□□□□□ -0.38
Vps54-202ENSMUST00000109578 Trmt2aQ8BNV1 574 aaKnown RBP12.65□□□□□ -0.38
Vps54-202ENSMUST00000109578 Bcas3Q8CCN5 928 aa12.65□□□□□ -0.38
Vps54-202ENSMUST00000109578 Mxra8Q9DBV4 442 aa12.65□□□□□ -0.38
Vps54-202ENSMUST00000109578 Cacna1sQ02789 1880 aa12.65□□□□□ -0.38
Vps54-202ENSMUST00000109578 Nfxl1E9Q8I7 918 aaKnown RBP12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Cacnb3P54285 484 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Gjb6P70689 261 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Nsun7Q14AW5 724 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Lrrc36Q3V0M2 755 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Glg1Q61543 1175 aaKnown RBP12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ublcp1Q8BGR9 318 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ddx47Q9CWX9 455 aaKnown RBP12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Cul5Q9D5V5 780 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Angptl3Q9R182 455 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Klra10Q9R1G6 266 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tsc2Q61037 1814 aa12.65□□□□□ -0.39
Vps54-202ENSMUST00000109578 Adgrf5G5E8Q8 1348 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Psd3Q2PFD7 1037 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Krt14Q61781 484 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ccdc189Q6NZQ0 333 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rufy1Q8BIJ7 712 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Lgi2Q8K4Z0 550 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tut1Q8R3F9 869 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Arfgap2Q99K28 520 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 AvenQ9D9K3 342 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Kif13bA0A286YCV9 1847 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Kcnh2O35219 1162 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 XlrP05531 208 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Gm5169Q5M8P2 212 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 SugctQ7TNE1 436 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 GopcQ8BH60 463 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 AopepQ8BXQ6 817 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 LgsnQ8CIX8 563 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Psmd2Q8VDM4 908 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Kif17Q99PW8 1038 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 1700016G14RikA0A286YCZ6 238 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Armc3A2AU72 881 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Vmn2r79E9Q067 851 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Specc1Q5SXY1 1067 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Gas8Q60779 478 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Bola2Q8BGS2 86 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Strip1Q8C079 837 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ttll1Q91V51 423 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Erp44Q9D1Q6 406 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 Coro7Q9D2V7 922 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 DexiQ9WUQ7 95 aa12.64□□□□□ -0.39
Vps54-202ENSMUST00000109578 GscQ02591 256 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Zmym1Q3TJB1 983 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Sh3gl2Q62420 352 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tm4sf1Q64302 202 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Galnt17Q7TT15 598 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Pcdhb5Q91XZ5 792 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Galnt15Q9D2N8 638 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Mzb1Q9D8I1 188 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Nr2f2P43135 414 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Wdhd1P59328 1117 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Lrig2Q52KR2 1054 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Cd37Q61470 281 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ccpg1Q640L3 753 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Usp17leQ7M764 540 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rfc4Q99J62 364 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ttc38A3KMP2 465 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tom1O88746 492 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 CpzQ8R4V4 654 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ptf1aQ9QX98 324 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ddx25Q9QY15 484 aa12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Orc1Q9Z1N2 840 aaKnown RBP12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rbm6S4R1W5 1118 aaKnown RBP12.63□□□□□ -0.39
Vps54-202ENSMUST00000109578 Cyp2e1Q05421 493 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Acsbg2Q2XU92 667 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Dpcr1Q3TNW5 500 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Zrsr2Q62377 462 aaKnown RBP12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Slc51bQ80WK2 128 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Q9D5Q8 446 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Dydc1Q9D9T0 175 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Scgb2b12S4R2L0 112 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ces1aE9PYP1 563 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ap1m1P35585 423 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Psmc2P46471 433 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Dcaf17Q3TUL7 519 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Map3k12Q60700 888 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Smco2Q9DA21 347 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Prpf40aQ9R1C7 953 aaKnown RBP12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 SlmapQ3URD3 845 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ift20Q61025 132 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Hdac10Q6P3E7 666 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Zfp446Q8C9M8 523 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Capn9Q9D805 690 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Mkrn1Q9QXP6 481 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tjp2Q9Z0U1 1167 aaKnown RBP12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Pex11aQ9Z211 246 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Muc3aQ3U5A2 218 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Qrich1Q3UA37 777 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Nr1d1Q3UV55 615 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Xrcc4Q924T3 326 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Six6os1Q9CTN5 574 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ascc1Q9D8Z1 356 aaKnown RBP12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Znf287Q9EQB9 759 aa12.62□□□□□ -0.39
Vps54-202ENSMUST00000109578 Sertad2Q9JJG5 309 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms