RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Kcna2P63141 499 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Rit2P70425 217 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Q3UK37 420 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 A1cfQ5YD48 595 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Cln3Q61124 438 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 IgflQ6B9Z0 140 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Cdkn2aipQ8BI72 563 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Dennd2aQ8C4S8 1000 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Lrp2bpQ9D4C6 346 aa11.08□□□□□ -0.63
Ccdc38-201ENSMUST00000092215 Serpina16D3Z660 418 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mt-CybP00158 381 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Taf1bP97358 586 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 P4ha1Q60715 534 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Fermt2Q8CIB5 680 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 1700129C05RikQ9CQ77 218 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Alpk1Q9CXB8 1231 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Chd1lQ9CXF7 900 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 MsraQ9D6Y7 233 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mipol1Q9D9F8 279 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mx2Q9WVP9 655 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Dock2Q8C3J5 1828 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Lama2Q60675 3118 aaKnown RBP11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Stx1aO35526 288 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Thap3Q8BJ25 218 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Golph3lQ8R088 285 aaKnown RBP11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Usp26Q99MX1 835 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Kremen1Q99N43 473 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 AacsQ9D2R0 672 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cntnap2Q9CPW0 1332 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Brca1P48754 1812 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Col24a1Q30D77 1733 aa11.08□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 OgdhlE9Q7L0 1029 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 TazI7HJS2 263 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Arhgap6O54834 987 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Idh1O88844 414 aaKnown RBP11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Actr2P61161 394 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ssrp1Q08943 708 aaKnown RBP11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 March6Q6ZQ89 909 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cyp26b1Q811W2 512 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pidd1Q9ERV7 915 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gm15262A0A140LIQ5 728 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 LtkP08923 888 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Etv6P97360 485 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Muc1Q02496 630 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Olfml1Q8BSH2 233 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 MafaQ8CF90 359 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 E2f4Q8R0K9 410 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 CrygnQ8VHL5 183 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 A0A1L1SQF0 893 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ccdc173A0JLY1 547 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Olfr67F8VPJ8 320 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Vmn2r71L7N2D8 855 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Dhx15O35286 795 aaKnown RBP11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Axin2O88566 840 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Krt18P05784 423 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Fdxacb1Q3UY23 622 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Epha7Q61772 998 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Map1sQ8C052 973 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Tulp1Q9Z273 543 aa11.07□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pgap3A2A559 320 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 UgcgO88693 394 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mov10P23249 1004 aaKnown RBP11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Rbp3P49194 1234 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Stxbp5lQ5DQR4 1185 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Rapgefl1Q68EF8 662 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Srd5a1Q68FF9 255 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Herc4Q6PAV2 1057 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Iws1Q8C1D8 766 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Lrrc41Q8K1C9 807 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 SrrtQ99MR6 875 aaKnown RBP11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cdc27A2A6Q5 825 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cyp2c39P56656 490 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 PrkczQ02956 592 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ppp2r5cQ60996 524 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Zmynd15Q8C0R7 736 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 OtoaQ8K561 1137 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Npm3Q9CPP0 175 aaKnown RBP11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Tbx18Q9EPZ6 613 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Plod3Q9R0E1 741 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Fndc3c1Q6DFV6 1356 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gm7168A0AUV4 508 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pbxip1Q3TVI8 727 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Zfp957Q3UT76 567 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Aggf1Q7TN31 711 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Rexo1Q7TT28 1213 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Trim9Q8C7M3 817 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Zcchc18Q8VD24 393 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Git2Q9JLQ2 708 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Hs6st3Q9QYK4 470 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Sucla2Q9Z2I9 463 aa11.06□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Apba3O88888 571 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Rufy4Q3TYX8 563 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mansc4Q3UU94 337 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Samhd1Q60710 627 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Camsap3Q80VC9 1252 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Nipa1Q8BHK1 323 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pnma1Q8C1C8 353 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gimap3Q99MI6 301 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Rpap3Q9D706 660 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cyp2s1Q9DBX6 501 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms