RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 1700129C05RikQ9CQ77 218 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Six6os1Q9CTN5 574 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Tmem39aQ9CYC3 486 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Pabpc6Q9D4E6 643 aaKnown RBP13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Smco2Q9DA21 347 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Cyp27a1Q9DBG1 533 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Irx5Q9JKQ4 484 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Rad9aQ9Z0F6 389 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Dnah12Q3V0Q1 3086 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Wdr33Q8K4P0 1330 aaKnown RBP13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Jbts17Q8CE72 3214 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Cep290Q6A078 2472 aa13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Myh9Q8VDD5 1960 aaKnown RBP13.82□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Gm7356A0A087WSA6 508 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Barx2O08686 283 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 PfkmP47857 780 aaKnown RBP13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Cdc25aP48964 514 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Rit2P70425 217 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Mcf2lQ64096 1149 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Antxr2Q6DFX2 487 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 GypcQ78HU7 95 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Ccdc172Q810N9 267 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 P2ry10Q8BFU7 328 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 LppQ8BFW7 613 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Appl2Q8K3G9 662 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 FcrlaQ920A9 352 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Syt17Q920M7 470 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Nr2e3Q9QXZ7 395 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Zfp804bA0A0G2JGH6 1343 aa13.81□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Lta4hP24527 611 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Yap1P46938 488 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Il1rapl1P59823 695 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Ppfia3P60469 1194 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Slc9a1Q61165 820 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Gja6Q6S5G4 283 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 1700010I14RikQ7TPG0 532 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Tbc1d22bQ80VE5 505 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Gripap1Q8VD04 806 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Olfr1494Q8VGP8 315 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Prb1Q91X93 504 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Pold3Q9EQ28 462 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Tfcp2Q9ERA0 502 aa13.8□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Gm5737A0A140LI11 423 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Tmem240B2RWJ3 173 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Elmsan1E9Q2I4 1089 aaKnown RBP13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Mpp3O88910 568 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Cyp2f2P33267 491 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 MafbP54841 323 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Actr2P61161 394 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Mgat3Q10470 538 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Hhla1Q3TYV2 514 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 KhsrpQ3U0V1 748 aaKnown RBP13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Dll1Q61483 722 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Avpr1aQ62463 423 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Ces1eQ64176 562 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 SdsQ8VBT2 327 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Myo15bI7HPW8 3033 aa13.79□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Smim10l2aA0A0B4J1F8 78 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Zbtb21E9Q444 1094 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 DmpkP54265 631 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Kmt5bQ3U8K7 883 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Xkr5Q5GH66 676 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 NostrinQ6WKZ7 506 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Cwf19l2Q8BG79 887 aaKnown RBP13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Eif4bQ8BGD9 611 aaKnown RBP13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 NcaphQ8C156 731 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Kcnj14Q8JZN3 434 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Tmem60Q8K174 133 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 KinQ8K339 391 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Vopp1Q8R1C3 172 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Ddx39aQ8VDW0 427 aaKnown RBP13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Mcoln1Q99J21 580 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Akirin1Q99LF1 191 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 MutyhQ99P21 515 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 TtpalQ9D3D0 343 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Myo1hQ9D6A1 958 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Vav3Q9R0C8 847 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 DgkeQ9R1C6 564 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Wnt8bQ9WUD6 350 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Msl3Q9WVG9 525 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 AdnpQ9Z103 1108 aaKnown RBP13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Mtmr9Q9Z2D0 545 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Col6a3E9PWQ3 3284 aa13.78□□□□□ -0.2
Ccdc28a-202ENSMUST00000080860 Ccdc78D3Z5T1 437 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Gp6P0C191 313 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Mcm3P25206 812 aaKnown RBP13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Irf3P70671 419 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 DmwdQ08274 665 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Entpd7Q3TCT4 606 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Bdp1Q571C7 2467 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Smad3Q8BUN5 425 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Tsr2Q8C8T8 191 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Piezo2Q8CD54 2822 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Adgrg3Q8R0T6 542 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 DutQ8VCG1 200 aaKnown RBP13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Ranbp17Q99NF8 1088 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 IydQ9DCX8 285 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 PycardQ9EPB4 193 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Map2k5Q9WVS7 448 aa13.77□□□□□ -0.21
Ccdc28a-202ENSMUST00000080860 Zscan4-ps1A0A1C7CYV3 506 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms