RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Znf518aB2RRF6 1478 aaKnown RBP9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 PtprmP28828 1452 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Tnfrsf18O35714 228 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Gnat1P20612 350 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Lrrn4P59383 733 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 SirpaP97797 513 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Chil6Q80W26 440 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Elmo3Q8BYZ7 720 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Spem2Q8C5U4 503 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Trim52Q8CDV4 233 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Abhd6Q8R2Y0 336 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Ccm2lQ8VCC6 481 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Filip1Q9CS72 1211 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 Plch2A2AP18 1501 aa9.34□□□□□ -0.91
Ccdc54-201ENSMUST00000062439 CltcQ68FD5 1675 aaKnown RBP9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Uggt2E9Q4X2 1504 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Olfr1436A0PK57 315 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Gm5795E9PZN8 263 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Aknad1E9Q8N6 675 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Gm3187M0QWW3 260 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Akap10O88845 662 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 RelP15307 587 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Usp7Q6A4J8 1103 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Slf2Q6P9P0 1278 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Exoc8Q6PGF7 716 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Tas2r104Q7M723 302 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Zc3h3Q8CHP0 950 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Pank1Q8K4K6 548 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Tada3Q8R0L9 432 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Lpgat1Q91YX5 370 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Myo5cE9Q1F5 1742 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Adgrl2Q8JZZ7 1487 aa9.33□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Naip6Q9JIB6 1403 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Topbp1Q6ZQF0 1515 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Samd1D3YXK1 519 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Eya3P97480 510 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Pwwp2aQ69Z61 730 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Zdhhc15Q8BGJ0 337 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Slc41a1Q8BJA2 512 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Slc39a6Q8C145 765 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 NpntQ91V88 561 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Cxxc5Q91WA4 317 aaKnown RBP9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Synpo2Q91YE8 1087 aaKnown RBP9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Smurf1Q9CUN6 731 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ppil4Q9CXG3 492 aaKnown RBP9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 ManfQ9CXI5 179 aaKnown RBP9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Actl11Q9D5V1 1207 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Mllt1Q9ERL0 547 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Myom2Q14BI5 1463 aa9.32□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Lmod3E9QA62 571 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Per3O70361 1113 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Fpr2O88536 351 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 MafP54843 370 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Sox9Q04887 507 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Rac2Q05144 192 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ice2Q3UZ18 988 aaKnown RBP9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Znrf3Q5SSZ7 913 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Gas7Q60780 421 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Trim36Q80WG7 729 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Pop1Q8K205 1045 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Angel1Q8VCU0 667 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Slc6a20aQ8VDB9 592 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ifrd2Q9D8U0 441 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Fam50aQ9WV03 339 aaKnown RBP9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Padi1Q9Z185 662 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Kdm3bQ6ZPY7 1562 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Trpm2Q91YD4 1506 aa9.31□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Dip2bQ3UH60 1574 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Zscan4-ps2A0A1C7CYU6 506 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Tspan6O70401 245 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ikzf1Q03267 517 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Slc45a4Q0P5V9 785 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Mier2Q3U3N0 541 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Hfe2Q7TQ32 420 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Hist1h2ahQ8CGP6 128 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ddx1Q91VR5 740 aaKnown RBP9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Brinp1Q920P3 760 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Rrp7aQ9D1C9 280 aaKnown RBP9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 4921524L21RikQ9D5T2 438 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Kif1bQ60575 1816 aaKnown RBP9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ercc6l2Q9JIM3 1537 aa9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Arid4bA2CG63 1314 aaKnown RBP9.3□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Usp54Q8BL06 1588 aaKnown RBP9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Adgrb2Q8CGM1 1561 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Dnajc25A2ALW5 357 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Cyb5rlB1AS42 316 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Svs3aF2Z472 265 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Gm10134F6ZQC6 126 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Kng1O08677 661 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Tnfrsf9P20334 256 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Aco1P28271 889 aaKnown RBP9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Prop1P97458 223 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Kcnma1Q08460 1209 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Arhgap44Q5SSM3 814 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 IbspQ61711 324 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Ankrd13dQ6PD24 605 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Naaladl1Q7M758 745 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 NkrfQ8BY02 690 aaKnown RBP9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Svs3bQ8BZH8 265 aa9.29□□□□□ -0.92
Ccdc54-201ENSMUST00000062439 Rnf112Q96DY5 654 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms