RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Pram1Q6BCL1 675 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Chn2Q80XD1 332 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ppp4r1Q8K2V1 951 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Q9CQF4 240 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 EhhadhQ9DBM2 718 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Gm28042B7ZCM9 1014 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Hoxb7P09024 217 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Slc12a1P55014 1095 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Polr2fP61219 127 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Tekt4Q149S1 447 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Fbxo9Q8BK06 437 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Mis18aQ9CZJ6 204 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Scgb2b11A0A087WR49 112 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 DtnbO70585 659 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Serpinb6dQ3UWK8 375 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Baiap3Q80TT2 1134 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Idi2Q8BFZ6 227 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ankk1Q8BZ25 745 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Atp1a1Q8VDN2 1023 aaKnown RBP11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Krt26Q3TRJ4 462 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Krt73Q6NXH9 539 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 PygbQ8CI94 843 aaKnown RBP11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Chek2Q9Z265 546 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Zfp558E9Q1J0 407 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Serpinb8O08800 374 aaKnown RBP11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 StrnO55106 780 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Tceal3Q8R0A5 200 aa11.14□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Scgb2b18A0A087WPA9 112 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Lmnb1P14733 588 aaKnown RBP11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Grin1P35438 938 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Sept1P42209 366 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ifit1Q64282 463 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 JrklB2RRL2 523 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Angpt1O08538 498 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Hoxa2P31245 372 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 HalP35492 657 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Mzt2Q9CQ25 159 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Tbkbp1A2A9T0 611 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Cyfip2Q5SQX6 1253 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Naa30Q8CES0 364 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pspc1Q8R326 523 aaKnown RBP11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ndufa5Q9CPP6 116 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 CapslQ6P8Y1 208 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Vipas39Q8BGQ1 491 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 ArpinQ9D0A3 226 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Gm382B1AXN3 1250 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 PicalmQ7M6Y3 660 aaKnown RBP11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Bicc1Q99MQ1 977 aaKnown RBP11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 HarsQ61035 509 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Rapgef5Q8C0Q9 814 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Adrm1Q9JKV1 407 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 AI481877A2ALV5 1481 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Snapc4Q8BP86 1333 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Vamp4O70480 141 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ankrd13cQ3UX43 541 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Fam160a1Q505K2 1081 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Bag5Q8CI32 447 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Retreg1dQ8VE91 480 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Mcrs1Q99L90 462 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Slc12a7Q9WVL3 1083 aa11.13□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Rabgap1lA6H6A9 815 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Msr1P30204 458 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Mybl2P48972 704 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ankrd27Q3UMR0 1048 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ksr1Q61097 873 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 SympkQ80X82 1284 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Rbbp8Q80YR6 893 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pnpt1Q8K1R3 783 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 HnmtQ91VF2 295 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 St5Q924W7 1134 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pdxdc1Q99K01 787 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Capn9Q9D805 690 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Rnf4Q9QZS2 194 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Cbx6Q9DBY5 414 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Trappc8E9PWG2 1437 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Kif1bQ60575 1816 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Haus6Q6NV99 933 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Erich5Q8K0S2 362 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Stx19Q8R1Q0 292 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Cbwd1Q8VEH6 393 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 HnrnprQ8VHM5 632 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Magi1Q6RHR9 1471 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 PolnQ7TQ07 864 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Eif2b2Q99LD9 351 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Pramef12Q9D2F1 463 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Thap11Q9JJD0 305 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Hic1Q9R1Y5 733 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ap1m1P35585 423 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Q3KNL4 93 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Jarid2Q62315 1234 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Antxr1Q9CZ52 562 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Ccdc81Q9D5W4 654 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Krt27Q9Z320 448 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Me3Q8BMF3 604 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Cog4Q8R1U1 785 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Tor1aip1Q921T2 595 aaKnown RBP11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Eid1Q9DCR4 169 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 AmphQ7TQF7 686 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Hacd3Q8K2C9 362 aa11.12□□□□□ -0.63
Col6a3-201ENSMUST00000056925 Mfap3lQ9D3X9 409 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms