RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 Dydc1Q9D9T0 175 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Gm28510A0A087WP28 240 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Clrn2B2RVW2 232 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Chrna9G3X8Z7 479 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Adam7O35227 789 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 ChkbO55229 394 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Rnpc3Q3UZ01 514 aaKnown RBP13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Prr7Q3V0I2 269 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 PRAG1Q571I4 1179 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tbc1d9bQ5SVR0 1263 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Znf280dQ68FE8 974 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tmc4Q7TQ65 694 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 GopcQ8BH60 463 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Rassf2Q8BMS9 326 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Lrrc41Q8K1C9 807 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ebag9Q9D0V7 213 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ascc1Q9D8Z1 356 aaKnown RBP13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Smco2Q9DA21 347 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Spocd1B1ASB6 936 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Rsbn1lD3Z0K6 821 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Trim43aQ3TL54 445 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Lrrc55Q3UY51 311 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fkbp3Q62446 224 aaKnown RBP13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 WaplQ65Z40 1200 aaKnown RBP13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Parp10Q8CIE4 960 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Alg1Q921Q3 482 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ddx47Q9CWX9 455 aaKnown RBP13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Cul5Q9D5V5 780 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 NapaQ9DB05 295 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tsc2Q61037 1814 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Apol6B7ZC55 329 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Prl2c2P04095 224 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 MybP06876 636 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Pls1Q3V0K9 630 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Hoxa13Q62424 386 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Krt74Q6IFZ9 495 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Krt87Q6IMF0 495 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Pdzph1Q8BGR1 1238 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ptrh1Q8BW00 204 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Cdk17Q8K0D0 523 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fbxo18Q8K2I9 1042 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ndst4Q9EQW8 872 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Sept3Q9Z1S5 350 aa13.12□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Pcif1P59114 706 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Hmgb1P63158 215 aaKnown RBP13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Nlrp2Q4PLS0 1046 aaKnown RBP13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Shc3Q61120 474 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Scnn1aQ61180 699 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 IarsQ8BU30 1262 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Gps2Q921N8 327 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ccdc105Q9D4K7 499 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Krt34Q9D646 392 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Gkap1Q9JMB0 366 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 AdnpQ9Z103 1108 aaKnown RBP13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Dnaaf5B9EJR8 853 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fbln2P37889 1221 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 MyrflQ3UN70 904 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Clul1Q3ZRW6 464 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ift20Q61025 132 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Rab11fip4Q8BQP8 635 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 RpainQ9CWY9 219 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Gm5114W4VSN8 858 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Dock5B2RY04 1868 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Col5a2Q3U962 1497 aa13.11□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ccdc88cQ6VGS5 2009 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ttc13A0A1L1SSC7 844 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Bpifb4A2BGH0 617 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 KhsrpQ3U0V1 748 aaKnown RBP13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Slc51bQ80WK2 128 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tor1aip1Q921T2 595 aaKnown RBP13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 PdhbQ9D051 359 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Cdca7Q9D0M2 382 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Man1a2P39098 641 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Stat3P42227 770 aaKnown RBP13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Hsd17b1P51656 344 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Actn4P57780 912 aaKnown RBP13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Pdrg1P59048 133 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Q32P12 615 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Lrrfip1Q3UZ39 729 aaKnown RBP13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tsga10Q6NY15 697 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Calhm4Q8CE93 315 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ttc5Q99LG4 440 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Dph6Q9CQ28 267 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Alpk1Q9CXB8 1231 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 March8Q9DBD2 286 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 SrcapA0A087WQ44 3271 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Opa1P58281 960 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Nol4P60954 483 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tmprss11aQ3UQ41 389 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Mapk6Q61532 720 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Cnnm4Q69ZF7 771 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Naa35Q6PHQ8 725 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 PaoxQ8C0L6 504 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Eef1gQ9D8N0 437 aaKnown RBP13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Azi2Q9QYP6 405 aa13.1□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Olfr247E9PVJ7 320 aa13.09□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Olfr819K7N727 320 aa13.09□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Vmn2r71L7N2D8 855 aa13.09□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Acsbg2Q2XU92 667 aa13.09□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Acot10Q32MW3 439 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 74.8 ms