RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YNL040WP53960 456 aaPredicted RBP-2.05□□□□□ -2.74
snR40snR40 SKI8Q02793 397 aaPredicted RBP-2.05□□□□□ -2.74
snR40snR40 UGO1Q03327 502 aa-2.05□□□□□ -2.74
snR40snR40 BUR2Q05949 395 aa-2.05□□□□□ -2.74
snR40snR40 AEP3Q12089 606 aa-2.05□□□□□ -2.74
snR40snR40 SWT1Q12104 458 aa-2.05□□□□□ -2.74
snR40snR40 NKP1Q12493 238 aa-2.05□□□□□ -2.74
snR40snR40 BUB3P26449 341 aa-2.06□□□□□ -2.74
snR40snR40 PDC2P32896 925 aa-2.06□□□□□ -2.74
snR40snR40 MFT1P33441 392 aaKnown RBP-2.06□□□□□ -2.74
snR40snR40 DID4P36108 232 aa-2.06□□□□□ -2.74
snR40snR40 AYR1P40471 297 aa-2.06□□□□□ -2.74
snR40snR40 DPB11P47027 764 aaPredicted RBP-2.06□□□□□ -2.74
snR40snR40 SGM1P47166 707 aa-2.06□□□□□ -2.74
snR40snR40 DSK2P48510 373 aa-2.06□□□□□ -2.74
snR40snR40 LCL3P53153 274 aa-2.06□□□□□ -2.74
snR40snR40 ERG26P53199 349 aaKnown RBP-2.06□□□□□ -2.74
snR40snR40 VMS1Q04311 632 aaKnown RBP-2.06□□□□□ -2.74
snR40snR40 POB3Q04636 552 aaKnown RBP-2.06□□□□□ -2.74
snR40snR40 GTO3Q04806 366 aa-2.06□□□□□ -2.74
snR40snR40 ECM30Q06673 1274 aa-2.06□□□□□ -2.74
snR40snR40 NTG2Q08214 380 aa-2.06□□□□□ -2.74
snR40snR40 MUM3Q08750 479 aa-2.06□□□□□ -2.74
snR40snR40 YOR365CQ08844 703 aa-2.06□□□□□ -2.74
snR40snR40 TY3A-GQ12173 290 aa-2.06□□□□□ -2.74
snR40snR40 DCP1Q12517 231 aaPredicted RBP-2.06□□□□□ -2.74
snR40snR40 NAG1Q8TGN9 163 aa-2.06□□□□□ -2.74
snR40snR40 TY3A-IQ99219 290 aa-2.06□□□□□ -2.74
snR40snR40 MIS1P09440 975 aaKnown RBP-2.07□□□□□ -2.74
snR40snR40 CUP2P15315 225 aa-2.07□□□□□ -2.74
snR40snR40 GLK1P17709 500 aaKnown RBP-2.07□□□□□ -2.74
snR40snR40 SLY1P22213 666 aa-2.07□□□□□ -2.74
snR40snR40 RCK1P38622 512 aa-2.07□□□□□ -2.74
snR40snR40 NAB3P38996 802 aaKnown RBP RIP-Chip data-2.07□□□□□ -2.74not detected
snR40snR40 YER188WP40103 239 aa-2.07□□□□□ -2.74
snR40snR40 GZF3P42944 551 aaKnown RBP-2.07□□□□□ -2.74
snR40snR40 VID30P53076 958 aa-2.07□□□□□ -2.74
snR40snR40 SKG3Q06315 1026 aa-2.07□□□□□ -2.74
snR40snR40 ASA1Q06822 443 aa-2.07□□□□□ -2.74
snR40snR40 BOL1Q3E793 110 aa-2.07□□□□□ -2.74
snR40snR40 ASP3-2P0CX77 362 aa-2.08□□□□□ -2.74
snR40snR40 ASP3-3P0CX78 362 aa-2.08□□□□□ -2.74
snR40snR40 ASP3-4P0CX79 362 aa-2.08□□□□□ -2.74
snR40snR40 ASP3-1P0CZ17 362 aa-2.08□□□□□ -2.74
snR40snR40 YLF2P38746 405 aa-2.08□□□□□ -2.74
snR40snR40 PHO86P46956 311 aa-2.08□□□□□ -2.74
snR40snR40 MNN11P46985 422 aaKnown RBP-2.08□□□□□ -2.74
snR40snR40 DSD1P53095 428 aa-2.08□□□□□ -2.74
snR40snR40 MST27P53176 234 aa-2.08□□□□□ -2.74
snR40snR40 YMR007WQ03675 126 aa-2.08□□□□□ -2.74
snR40snR40 YOL019WQ08157 551 aa-2.08□□□□□ -2.74
snR40snR40 NCE102Q12207 173 aaRIP-Chip data-2.08□□□□□ -2.74not detected
snR40snR40 YAR066WP0CX18 203 aa-2.09□□□□□ -2.74
snR40snR40 YHR214WP0CX19 203 aa-2.09□□□□□ -2.74
snR40snR40 CTA1P15202 515 aa-2.09□□□□□ -2.74
snR40snR40 DAP2P18962 818 aa-2.09□□□□□ -2.74
snR40snR40 FPR1P20081 114 aaKnown RBP-2.09□□□□□ -2.74
snR40snR40 PRP19P32523 503 aaKnown RBP-2.09□□□□□ -2.74
snR40snR40 UBP11P36026 717 aa-2.09□□□□□ -2.74
snR40snR40 UIP3P39547 235 aa-2.09□□□□□ -2.74
snR40snR40 TRS85P46944 698 aa-2.09□□□□□ -2.74
snR40snR40 PIB2P53191 635 aa-2.09□□□□□ -2.74
snR40snR40 YLR345WQ06137 509 aa-2.09□□□□□ -2.74
snR40snR40 YLL032CQ07834 825 aaKnown RBP RIP-Chip data-2.09□□□□□ -2.74not detected
snR40snR40 YPR063CQ12160 140 aa-2.09□□□□□ -2.74
snR40snR40 CDC7P06243 507 aa-2.1□□□□□ -2.75
snR40snR40 SGA1P08019 549 aa-2.1□□□□□ -2.75
snR40snR40 NSP1P14907 823 aaKnown RBP-2.1□□□□□ -2.75
snR40snR40 TIP1P27654 210 aaPredicted RBP-2.1□□□□□ -2.75
snR40snR40 ITR1P30605 584 aa-2.1□□□□□ -2.75
snR40snR40 ISC1P40015 477 aaKnown RBP-2.1□□□□□ -2.75
snR40snR40 UFE1P41834 346 aa-2.1□□□□□ -2.75
snR40snR40 YJR008WP47085 338 aa-2.1□□□□□ -2.75
snR40snR40 YMR166CQ03829 368 aa-2.1□□□□□ -2.75
snR40snR40 RTN1Q04947 295 aaKnown RBP-2.1□□□□□ -2.75
snR40snR40 NOP8Q08287 484 aaPredicted RBP-2.1□□□□□ -2.75
snR40snR40 SKI7Q08491 747 aaPredicted RBP-2.1□□□□□ -2.75
snR40snR40 YDL211CQ12121 372 aa-2.1□□□□□ -2.75
snR40snR40 PKH2Q12236 1081 aaKnown RBP-2.1□□□□□ -2.75
snR40snR40 CPA1P07258 411 aaKnown RBP-2.11□□□□□ -2.75
snR40snR40 EPT1P22140 391 aa-2.11□□□□□ -2.75
snR40snR40 PHO3P24031 467 aa-2.11□□□□□ -2.75
snR40snR40 BUD5P25300 642 aaPredicted RBP-2.11□□□□□ -2.75
snR40snR40 MSP1P28737 362 aa-2.11□□□□□ -2.75
snR40snR40 GRE3P38715 327 aaKnown RBP RIP-Chip data-2.11□□□□□ -2.75not detected
snR40snR40 BDH1P39714 382 aa-2.11□□□□□ -2.75
snR40snR40 CHZ1P40019 153 aaPredicted RBP-2.11□□□□□ -2.75
snR40snR40 RRT13P40042 185 aa-2.11□□□□□ -2.75
snR40snR40 CDH1P53197 566 aa-2.11□□□□□ -2.75
snR40snR40 SYF2P53277 215 aaPredicted RBP-2.11□□□□□ -2.75
snR40snR40 BNI5P53890 448 aaKnown RBP-2.11□□□□□ -2.75
snR40snR40 TGL2P54857 326 aa-2.11□□□□□ -2.75
snR40snR40 RRP9Q06506 573 aaKnown RBP-2.11□□□□□ -2.75
snR40snR40 MFG1Q07684 458 aa-2.11□□□□□ -2.75
snR40snR40 RTT109Q07794 436 aa-2.11□□□□□ -2.75
snR40snR40 YGL010WP25338 174 aa-2.12□□□□□ -2.75
snR40snR40 GCD7P32502 381 aaPredicted RBP-2.12□□□□□ -2.75
snR40snR40 COX13P32799 129 aa-2.12□□□□□ -2.75
snR40snR40 YKL100CP34248 587 aa-2.12□□□□□ -2.75
snR40snR40 TCD2P36101 447 aaKnown RBP-2.12□□□□□ -2.75
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms