RNA–Protein interactions for RNA: snR190

snR190, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR190, Length 190 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR190snR190 REC114P32841 428 aa0.84□□□□□ -2.27
snR190snR190 MID2P36027 376 aa0.84□□□□□ -2.27
snR190snR190 THI2P38141 450 aa0.84□□□□□ -2.27
snR190snR190 CST26P38226 397 aa0.84□□□□□ -2.27
snR190snR190 CCT2P39076 527 aaKnown RBP0.84□□□□□ -2.27
snR190snR190 DOT5P40553 215 aa0.84□□□□□ -2.27
snR190snR190 GAB1P41733 394 aa0.84□□□□□ -2.27
snR190snR190 TFG2P41896 400 aaPredicted RBP0.84□□□□□ -2.27
snR190snR190 SSU1P41930 458 aa0.84□□□□□ -2.27
snR190snR190 UPF3P48412 387 aaKnown RBP0.84□□□□□ -2.27
snR190snR190 PCP1P53259 346 aa0.84□□□□□ -2.27
snR190snR190 VPS75P53853 264 aa0.84□□□□□ -2.27
snR190snR190 KTR5P53966 522 aaPredicted RBP0.84□□□□□ -2.27
snR190snR190 TAP42Q04372 366 aa0.84□□□□□ -2.27
snR190snR190 MRD1Q06106 887 aaKnown RBP0.84□□□□□ -2.27
snR190snR190 CUE5Q08412 411 aaKnown RBP0.84□□□□□ -2.27
snR190snR190 SNX3Q08826 162 aaKnown RBP0.84□□□□□ -2.27
snR190snR190 YPR022CQ12139 1133 aa0.84□□□□□ -2.27
snR190snR190 PKH2Q12236 1081 aaKnown RBP0.84□□□□□ -2.27
snR190snR190 ENT1Q12518 454 aa0.84□□□□□ -2.27
snR190snR190 SEC39Q12745 709 aa0.84□□□□□ -2.27
snR190snR190 YLR278CQ05854 1341 aa0.84□□□□□ -2.28
snR190snR190 YML133CQ03099 1374 aa0.83□□□□□ -2.28
snR190snR190 YLL067CQ07888 1374 aa0.83□□□□□ -2.28
snR190snR190 YLL066CQ99208 1374 aa0.83□□□□□ -2.28
snR190snR190 FOB1O13329 566 aa0.83□□□□□ -2.28
snR190snR190 TEF1P02994 458 aaKnown RBP0.83□□□□□ -2.28
snR190snR190 GCN4P03069 281 aa0.83□□□□□ -2.28
snR190snR190 SLY1P22213 666 aa0.83□□□□□ -2.28
snR190snR190 SPB1P25582 841 aaPredicted RBP0.83□□□□□ -2.28
snR190snR190 RAD14P28519 371 aa0.83□□□□□ -2.28
snR190snR190 AFG1P32317 509 aa0.83□□□□□ -2.28
snR190snR190 APE2P32454 952 aaKnown RBP0.83□□□□□ -2.28
snR190snR190 KAR9P32526 644 aa0.83□□□□□ -2.28
snR190snR190 MUD1P32605 298 aaKnown RBP0.83□□□□□ -2.28
snR190snR190 NPL6P32832 435 aa0.83□□□□□ -2.28
snR190snR190 NIP100P33420 868 aa0.83□□□□□ -2.28
snR190snR190 SEC66P33754 206 aa0.83□□□□□ -2.28
snR190snR190 YHR131CP38835 850 aa0.83□□□□□ -2.28
snR190snR190 AIM10P39965 576 aaKnown RBP0.83□□□□□ -2.28
snR190snR190 YEL057CP39983 233 aa0.83□□□□□ -2.28
snR190snR190 UTP18P40362 594 aaPredicted RBP0.83□□□□□ -2.28
snR190snR190 MET28P40573 187 aa0.83□□□□□ -2.28
snR190snR190 VMA13P41807 478 aaKnown RBP0.83□□□□□ -2.28
snR190snR190 RMD8P43620 662 aa0.83□□□□□ -2.28
snR190snR190 ECM27P47144 725 aa0.83□□□□□ -2.28
snR190snR190 YGR149WP48236 432 aa0.83□□□□□ -2.28
snR190snR190 RMD9P53140 646 aaKnown RBP0.83□□□□□ -2.28
snR190snR190 TWF1P53250 332 aa0.83□□□□□ -2.28
snR190snR190 RTS3P53289 263 aa0.83□□□□□ -2.28
snR190snR190 YNR048WP53740 393 aa0.83□□□□□ -2.28
snR190snR190 FRE4P53746 719 aa0.83□□□□□ -2.28
snR190snR190 DSL1P53847 754 aa0.83□□□□□ -2.28
snR190snR190 YDR239CQ03780 787 aa0.83□□□□□ -2.28
snR190snR190 YDR387CQ04162 555 aa0.83□□□□□ -2.28
snR190snR190 IRC25Q07951 179 aa0.83□□□□□ -2.28
snR190snR190 YDR056CQ12025 205 aa0.83□□□□□ -2.28
snR190snR190 HIS4P00815 799 aaKnown RBP0.82□□□□□ -2.28
snR190snR190 ARG4P04076 463 aaPredicted RBP0.82□□□□□ -2.28
snR190snR190 TOP1P04786 769 aa0.82□□□□□ -2.28
snR190snR190 RPI1P23250 407 aaKnown RBP0.82□□□□□ -2.28
snR190snR190 SNT1P25357 1226 aa0.82□□□□□ -2.28
snR190snR190 OCA4P25366 362 aa0.82□□□□□ -2.28
snR190snR190 IDH2P28241 369 aaKnown RBP0.82□□□□□ -2.28
snR190snR190 PRP21P32524 280 aaPredicted RBP0.82□□□□□ -2.28
snR190snR190 CSE2P33308 149 aa0.82□□□□□ -2.28
snR190snR190 CMC1P36064 111 aa0.82□□□□□ -2.28
snR190snR190 VID24P38263 362 aa0.82□□□□□ -2.28
snR190snR190 LYS1P38998 373 aaRIP-Chip data0.82□□□□□ -2.28not detected
snR190snR190 HXT14P42833 540 aa0.82□□□□□ -2.28
snR190snR190 YJR085CP47131 105 aaKnown RBP0.82□□□□□ -2.28
snR190snR190 ARE2P53629 642 aaKnown RBP0.82□□□□□ -2.28
snR190snR190 HSP31Q04432 237 aa0.82□□□□□ -2.28
snR190snR190 SGT1Q08446 395 aa0.82□□□□□ -2.28
snR190snR190 ATG29Q12092 213 aa0.82□□□□□ -2.28
snR190snR190 ORT1Q12375 292 aa0.82□□□□□ -2.28
snR190snR190 AHC1Q12433 566 aa0.82□□□□□ -2.28
snR190snR190 RTP1Q12751 981 aa0.82□□□□□ -2.28
snR190snR190 YBL111CQ3E7Y5 667 aa0.82□□□□□ -2.28
snR190snR190 CCH1P50077 2039 aa0.82□□□□□ -2.28
snR190snR190 RIP1P08067 215 aa0.81□□□□□ -2.28
snR190snR190 SPS4P09937 338 aa0.81□□□□□ -2.28
snR190snR190 SEC63P14906 663 aa0.81□□□□□ -2.28
snR190snR190 MET8P15807 274 aa0.81□□□□□ -2.28
snR190snR190 PMT1P33775 817 aa0.81□□□□□ -2.28
snR190snR190 YHR054CP38780 354 aa0.81□□□□□ -2.28
snR190snR190 MIG3P39943 394 aa0.81□□□□□ -2.28
snR190snR190 MET18P40469 1032 aa0.81□□□□□ -2.28
snR190snR190 SIM1P40472 476 aa0.81□□□□□ -2.28
snR190snR190 SPO22P40511 975 aa0.81□□□□□ -2.28
snR190snR190 VTC2P43585 828 aa0.81□□□□□ -2.28
snR190snR190 AZR1P50080 613 aa0.81□□□□□ -2.28
snR190snR190 YIF1P53845 314 aaKnown RBP0.81□□□□□ -2.28
snR190snR190 GIR2Q03768 265 aaPredicted RBP0.81□□□□□ -2.28
snR190snR190 SYF1Q04048 859 aaPredicted RBP0.81□□□□□ -2.28
snR190snR190 PLP2Q12017 286 aa0.81□□□□□ -2.28
snR190snR190 YRM1Q12340 786 aa0.81□□□□□ -2.28
snR190snR190 IZH2Q12442 317 aa0.81□□□□□ -2.28
snR190snR190 ILV5P06168 395 aaKnown RBP0.8□□□□□ -2.28
snR190snR190 GPH1P06738 902 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms