RNA–Protein interactions for RNA: YPR172W

YPR172W, Transcript of Putative pyridoxal 5'-phosphate synthase, yeast

Gene YPR172W, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR172W	YPR172W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
YPR172W	YPR172W	ATP10	P18496	279 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	OCA4	P25366	362 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	ECM25	P32525	599 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	SEC66	P33754	206 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	CST26	P38226	397 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	TFG2	P41896	400 aa	Predicted RBP	2.7	□□□□□ -1.98
YPR172W	YPR172W	ECM27	P47144	725 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	PCP1	P53259	346 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	DSL1	P53847	754 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	PPM1	Q04081	328 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	TAP42	Q04372	366 aa		2.7	□□□□□ -1.98
YPR172W	YPR172W	HIS4	P00815	799 aa	Known RBP	2.69	□□□□□ -1.98
YPR172W	YPR172W	TRP1	P00912	224 aa		2.69	□□□□□ -1.98
YPR172W	YPR172W	NFT1	P0CE68	1218 aa		2.69	□□□□□ -1.98
YPR172W	YPR172W	AAC3	P18238	307 aa		2.69	□□□□□ -1.98
YPR172W	YPR172W	RAD14	P28519	371 aa		2.69	□□□□□ -1.98
YPR172W	YPR172W	MTM1	P53320	366 aa		2.69	□□□□□ -1.98
YPR172W	YPR172W	SGT1	Q08446	395 aa		2.69	□□□□□ -1.98
YPR172W	YPR172W	TOP1	P04786	769 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	SPB1	P25582	841 aa	Predicted RBP	2.68	□□□□□ -1.98
YPR172W	YPR172W	POP5	P28005	173 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	AFG1	P32317	509 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	CMC1	P36064	111 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	THI2	P38141	450 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	DOT5	P40553	215 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	YNR048W	P53740	393 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	GIR2	Q03768	265 aa	Predicted RBP	2.68	□□□□□ -1.98
YPR172W	YPR172W	YDR239C	Q03780	787 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	HSP31	Q04432	237 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	YDR056C	Q12025	205 aa		2.68	□□□□□ -1.98
YPR172W	YPR172W	ARG4	P04076	463 aa	Predicted RBP	2.67	□□□□□ -1.98
YPR172W	YPR172W	CCT2	P39076	527 aa	Known RBP	2.67	□□□□□ -1.98
YPR172W	YPR172W	YGR149W	P48236	432 aa		2.67	□□□□□ -1.98
YPR172W	YPR172W	ATG29	Q12092	213 aa		2.67	□□□□□ -1.98
YPR172W	YPR172W	YPR022C	Q12139	1133 aa		2.67	□□□□□ -1.98
YPR172W	YPR172W	SPS4	P09937	338 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	APE2	P32454	952 aa	Known RBP	2.66	□□□□□ -1.98
YPR172W	YPR172W	NUP2	P32499	720 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	PRP21	P32524	280 aa	Predicted RBP	2.66	□□□□□ -1.98
YPR172W	YPR172W	KAR9	P32526	644 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	MUD1	P32605	298 aa	Known RBP	2.66	□□□□□ -1.98
YPR172W	YPR172W	NIP100	P33420	868 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	YEL057C	P39983	233 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	GAB1	P41733	394 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	VTC2	P43585	828 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	YDR387C	Q04162	555 aa		2.66	□□□□□ -1.98
YPR172W	YPR172W	CUE5	Q08412	411 aa	Known RBP	2.66	□□□□□ -1.98
YPR172W	YPR172W	SNX3	Q08826	162 aa	Known RBP	2.66	□□□□□ -1.98
YPR172W	YPR172W	YML133C	Q03099	1374 aa		2.65	□□□□□ -1.98
YPR172W	YPR172W	YLL067C	Q07888	1374 aa		2.65	□□□□□ -1.98
YPR172W	YPR172W	YLL066C	Q99208	1374 aa		2.65	□□□□□ -1.98
YPR172W	YPR172W	TEF1	P02994	458 aa	Known RBP	2.65	□□□□□ -1.99
YPR172W	YPR172W	SLY1	P22213	666 aa		2.65	□□□□□ -1.99
YPR172W	YPR172W	VID24	P38263	362 aa		2.65	□□□□□ -1.99
YPR172W	YPR172W	YBR137W	P38276	179 aa		2.65	□□□□□ -1.99
YPR172W	YPR172W	UTP18	P40362	594 aa	Predicted RBP	2.65	□□□□□ -1.99
YPR172W	YPR172W	BRO1	P48582	844 aa		2.65	□□□□□ -1.99
YPR172W	YPR172W	RNY1	Q02933	434 aa	Known RBP	2.65	□□□□□ -1.99
YPR172W	YPR172W	YLR278C	Q05854	1341 aa		2.65	□□□□□ -1.99
YPR172W	YPR172W	IDH2	P28241	369 aa	Known RBP	2.64	□□□□□ -1.99
YPR172W	YPR172W	ITR1	P30605	584 aa		2.64	□□□□□ -1.99
YPR172W	YPR172W	MRPL10	P36520	322 aa		2.64	□□□□□ -1.99
YPR172W	YPR172W	YHR054C	P38780	354 aa		2.64	□□□□□ -1.99
YPR172W	YPR172W	LYS1	P38998	373 aa	RIP-Chip data	2.64	□□□□□ -1.99	not detected
YPR172W	YPR172W	VMA13	P41807	478 aa	Known RBP	2.64	□□□□□ -1.99
YPR172W	YPR172W	HXT14	P42833	540 aa		2.64	□□□□□ -1.99
YPR172W	YPR172W	FRE4	P53746	719 aa		2.64	□□□□□ -1.99
YPR172W	YPR172W	CYC3	P06182	269 aa		2.63	□□□□□ -1.99
YPR172W	YPR172W	GPH1	P06738	902 aa	Known RBP	2.63	□□□□□ -1.99
YPR172W	YPR172W	RPI1	P23250	407 aa	Known RBP	2.63	□□□□□ -1.99
YPR172W	YPR172W	SNT1	P25357	1226 aa		2.63	□□□□□ -1.99
YPR172W	YPR172W	NPL6	P32832	435 aa		2.63	□□□□□ -1.99
YPR172W	YPR172W	ARE2	P53629	642 aa	Known RBP	2.63	□□□□□ -1.99
YPR172W	YPR172W	RQC1	Q05468	723 aa	Known RBP	2.63	□□□□□ -1.99
YPR172W	YPR172W	RTP1	Q12751	981 aa		2.63	□□□□□ -1.99
YPR172W	YPR172W	PMT1	P33775	817 aa		2.62	□□□□□ -1.99
YPR172W	YPR172W	AIM10	P39965	576 aa	Known RBP	2.62	□□□□□ -1.99
YPR172W	YPR172W	VID27	P40157	782 aa		2.62	□□□□□ -1.99
YPR172W	YPR172W	YJR085C	P47131	105 aa	Known RBP	2.62	□□□□□ -1.99
YPR172W	YPR172W	RPT6	Q01939	405 aa	Known RBP	2.62	□□□□□ -1.99
YPR172W	YPR172W	IMH1	Q06704	911 aa	Known RBP	2.62	□□□□□ -1.99
YPR172W	YPR172W	IMP2'	P32351	346 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	ESL1	P40456	1118 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	MET18	P40469	1032 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	SPO22	P40511	975 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	SSU1	P41930	458 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	YIF1	P53845	314 aa	Known RBP	2.61	□□□□□ -1.99
YPR172W	YPR172W	REX4	Q08237	289 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	PLP2	Q12017	286 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	RIM20	Q12033	661 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	YBL111C	Q3E7Y5	667 aa		2.61	□□□□□ -1.99
YPR172W	YPR172W	RIP1	P08067	215 aa		2.6	□□□□□ -1.99
YPR172W	YPR172W	VHC1	P38329	1120 aa		2.6	□□□□□ -1.99
YPR172W	YPR172W	UTP9	P38882	575 aa	Known RBP	2.6	□□□□□ -1.99
YPR172W	YPR172W	PCF11	P39081	626 aa	Predicted RBP	2.6	□□□□□ -1.99
YPR172W	YPR172W	DFG10	P40526	253 aa		2.6	□□□□□ -1.99
YPR172W	YPR172W	YJR011C	P47086	261 aa	Predicted RBP	2.6	□□□□□ -1.99
YPR172W	YPR172W	JJJ1	P53863	590 aa		2.6	□□□□□ -1.99
YPR172W	YPR172W	KTR5	P53966	522 aa	Predicted RBP	2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms