RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	YJR112W-A	Q3E743	109 aa		4.6	□□□□□ -1.67
YDC1	YPL087W	CDC8	P00572	216 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	GCN4	P03069	281 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	PMS1	P14242	873 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	ART10	P18634	518 aa	Known RBP	4.59	□□□□□ -1.67
YDC1	YPL087W	PRO3	P32263	286 aa	Known RBP	4.59	□□□□□ -1.67
YDC1	YPL087W	ACH1	P32316	526 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	UBP11	P36026	717 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	PCH2	P38126	564 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	OLA1	P38219	394 aa	Known RBP	4.59	□□□□□ -1.67
YDC1	YPL087W	REG2	P38232	338 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	SHQ1	P40486	507 aa	Predicted RBP	4.59	□□□□□ -1.67
YDC1	YPL087W	GSC2	P40989	1895 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	RMD8	P43620	662 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	YGL260W	P53056	76 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	RHO4	Q00246	291 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	YMR317W	Q04893	1140 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	FUS2	Q05670	677 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	YPR078C	Q06813	372 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	RUD3	Q12234	484 aa	Known RBP	4.59	□□□□□ -1.67
YDC1	YPL087W	MED1	Q12321	566 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	YPT6	Q99260	215 aa		4.59	□□□□□ -1.67
YDC1	YPL087W	KGD1	P20967	1014 aa	Known RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	SEC62	P21825	274 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	SGF29	P25554	259 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	PAP1	P29468	568 aa	Known RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	PSO2	P30620	661 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	SYN8	P31377	255 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	HXT1	P32465	570 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	UBC6	P33296	250 aa	Predicted RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YDC1	YPL087W	EFM4	P40516	257 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	ALK1	P43633	760 aa	Known RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	UPF3	P48412	387 aa	Known RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	RBG2	P53295	368 aa	Known RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	SAM50	P53969	484 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	YPL014W	Q02606	381 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	NGL3	Q03210	505 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	GIR2	Q03768	265 aa	Predicted RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	FIN1	Q03898	291 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	FMP45	Q07651	309 aa		4.58	□□□□□ -1.68
YDC1	YPL087W	RIO1	Q12196	484 aa	Known RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	BRR1	Q99177	341 aa	Predicted RBP	4.58	□□□□□ -1.68
YDC1	YPL087W	TY1B-A	O13527	1196 aa	Known RBP	4.57	□□□□□ -1.68
YDC1	YPL087W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
YDC1	YPL087W	YML002W	P0CF17	737 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	EST1	P17214	699 aa	Predicted RBP	4.57	□□□□□ -1.68
YDC1	YPL087W	ISY1	P21374	235 aa	Predicted RBP	4.57	□□□□□ -1.68
YDC1	YPL087W	GUF1	P46943	645 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	LCL3	P53153	274 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	TOF1	P53840	1238 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	MRS2	Q01926	470 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	CUR1	Q06469	252 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	NOP6	Q07623	225 aa	Known RBP	4.57	□□□□□ -1.68
YDC1	YPL087W	AHC1	Q12433	566 aa		4.57	□□□□□ -1.68
YDC1	YPL087W	HIP1	P06775	603 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	CBS1	P14066	229 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	OLE1	P21147	510 aa	Known RBP	4.56	□□□□□ -1.68
YDC1	YPL087W	OCA4	P25366	362 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	DEP1	P31385	405 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	ECM15	P35195	104 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	YBL028C	P38202	106 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	YHR131C	P38835	850 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	SEC9	P40357	651 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	IPI3	P53877	555 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	TOF2	Q02208	771 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	THI20	Q08224	551 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	PDH1	Q12428	516 aa	Known RBP	4.56	□□□□□ -1.68
YDC1	YPL087W	AVL9	Q12500	764 aa		4.56	□□□□□ -1.68
YDC1	YPL087W	PDA1	P16387	420 aa	Known RBP	4.55	□□□□□ -1.68
YDC1	YPL087W	SPO12	P17123	173 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	CLB1	P24868	471 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	RAD57	P25301	460 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	SEC1	P30619	724 aa	Known RBP	4.55	□□□□□ -1.68
YDC1	YPL087W	NIP100	P33420	868 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	SIP3	P38717	1229 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	YHR210C	P38893	341 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	GAA1	P39012	614 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	CCT6	P39079	546 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	RPC17	P47076	161 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	YJR154W	P47181	346 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	HOS2	P53096	452 aa	Predicted RBP	4.55	□□□□□ -1.68
YDC1	YPL087W	BTN2	P53286	410 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	CWC22	P53333	577 aa	Known RBP	4.55	□□□□□ -1.68
YDC1	YPL087W	ERV41	Q04651	352 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	DIC1	Q06143	298 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	YDL057W	Q07379	328 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	RLP24	Q07915	199 aa	Known RBP	4.55	□□□□□ -1.68
YDC1	YPL087W	DAP1	Q12091	152 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	YKL068W-A	Q3E826	78 aa		4.55	□□□□□ -1.68
YDC1	YPL087W	CAR1	P00812	333 aa	Known RBP	4.54	□□□□□ -1.68
YDC1	YPL087W	ILV1	P00927	576 aa	Known RBP	4.54	□□□□□ -1.68
YDC1	YPL087W	TCP1	P12612	559 aa	Known RBP	4.54	□□□□□ -1.68
YDC1	YPL087W	SHP1	P34223	423 aa		4.54	□□□□□ -1.68
YDC1	YPL087W	BLI1	P35727	113 aa		4.54	□□□□□ -1.68
YDC1	YPL087W	FMP46	P36141	133 aa	Known RBP	4.54	□□□□□ -1.68
YDC1	YPL087W	SMF1	P38925	575 aa		4.54	□□□□□ -1.68
YDC1	YPL087W	MAF1	P41910	395 aa		4.54	□□□□□ -1.68
YDC1	YPL087W	TOS3	P43637	560 aa		4.54	□□□□□ -1.68
YDC1	YPL087W	IKS1	P47042	667 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms