RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RBS1Q05672 457 aaKnown RBP2.15□□□□□ -2.06
SEC16YPL085W PEX30Q06169 523 aa2.15□□□□□ -2.06
SEC16YPL085W SHS1Q07657 551 aa2.15□□□□□ -2.06
SEC16YPL085W DIA2Q08496 732 aaPredicted RBP2.15□□□□□ -2.06
SEC16YPL085W REC8Q12188 680 aa2.15□□□□□ -2.06
SEC16YPL085W RPN5Q12250 445 aaKnown RBP2.15□□□□□ -2.06
SEC16YPL085W YLR108CQ12259 485 aa2.15□□□□□ -2.06
SEC16YPL085W WHI5Q12416 295 aa2.15□□□□□ -2.06
SEC16YPL085W FSH3Q99369 266 aa2.15□□□□□ -2.06
SEC16YPL085W NUP1P20676 1076 aa2.15□□□□□ -2.07
SEC16YPL085W MRPL8P22353 238 aa2.15□□□□□ -2.07
SEC16YPL085W DBP1P24784 617 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W UBC8P28263 218 aa2.15□□□□□ -2.07
SEC16YPL085W TRK2P28584 889 aa2.15□□□□□ -2.07
SEC16YPL085W MSN2P33748 704 aa2.15□□□□□ -2.07
SEC16YPL085W REF2P42073 533 aaPredicted RBP2.15□□□□□ -2.07
SEC16YPL085W IRC7P43623 340 aa2.15□□□□□ -2.07
SEC16YPL085W COQ5P49017 307 aa2.15□□□□□ -2.07
SEC16YPL085W SAM50P53969 484 aa2.15□□□□□ -2.07
SEC16YPL085W ELP4Q02884 456 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W YMR099CQ03161 297 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W YMR178WQ03219 274 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W MTQ2Q03920 221 aaPredicted RBP2.15□□□□□ -2.07
SEC16YPL085W RPN9Q04062 393 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W SMA2Q04658 369 aa2.15□□□□□ -2.07
SEC16YPL085W HRD3Q05787 833 aa2.15□□□□□ -2.07
SEC16YPL085W NNT1Q05874 261 aa2.15□□□□□ -2.07
SEC16YPL085W NUS1Q12063 375 aa2.15□□□□□ -2.07
SEC16YPL085W YEL077CQ3E7X8 1277 aa2.15□□□□□ -2.07
SEC16YPL085W ILV5P06168 395 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W SUI3P09064 285 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W MAS2P11914 482 aa2.15□□□□□ -2.07
SEC16YPL085W TYR1P20049 452 aa2.15□□□□□ -2.07
SEC16YPL085W CLN1P20437 546 aa2.15□□□□□ -2.07
SEC16YPL085W MEI5P32489 222 aa2.15□□□□□ -2.07
SEC16YPL085W SNL1P40548 159 aa2.15□□□□□ -2.07
SEC16YPL085W MDV1P47025 714 aa2.15□□□□□ -2.07
SEC16YPL085W SKP1P52286 194 aa2.15□□□□□ -2.07
SEC16YPL085W AIM14P53109 570 aa2.15□□□□□ -2.07
SEC16YPL085W SLD3P53135 668 aa2.15□□□□□ -2.07
SEC16YPL085W MAL12P53341 584 aa2.15□□□□□ -2.07
SEC16YPL085W YNL140CP53910 189 aa2.15□□□□□ -2.07
SEC16YPL085W OAZ1Q02803 292 aa2.15□□□□□ -2.07
SEC16YPL085W YDR132CQ03900 495 aa2.15□□□□□ -2.07
SEC16YPL085W ARP9Q05123 467 aa2.15□□□□□ -2.07
SEC16YPL085W ARO10Q06408 635 aa2.15□□□□□ -2.07
SEC16YPL085W TAZ1Q06510 381 aa2.15□□□□□ -2.07
SEC16YPL085W GUP2Q08929 609 aa2.15□□□□□ -2.07
SEC16YPL085W GRE1Q08969 168 aa2.15□□□□□ -2.07
SEC16YPL085W SUC2P00724 532 aa2.15□□□□□ -2.07
SEC16YPL085W ERG11P10614 530 aa2.15□□□□□ -2.07
SEC16YPL085W PET54P10834 293 aa2.15□□□□□ -2.07
SEC16YPL085W SPO12P17123 173 aa2.15□□□□□ -2.07
SEC16YPL085W SPO7P18410 259 aa2.15□□□□□ -2.07
SEC16YPL085W EPT1P22140 391 aa2.15□□□□□ -2.07
SEC16YPL085W BUB3P26449 341 aa2.15□□□□□ -2.07
SEC16YPL085W DAL3P32459 195 aa2.15□□□□□ -2.07
SEC16YPL085W RIB7P33312 244 aa2.15□□□□□ -2.07
SEC16YPL085W PET10P36139 283 aa2.15□□□□□ -2.07
SEC16YPL085W TAT1P38085 619 aa2.15□□□□□ -2.07
SEC16YPL085W COG3P40094 801 aa2.15□□□□□ -2.07
SEC16YPL085W KHA1P40309 873 aa2.15□□□□□ -2.07
SEC16YPL085W ELO3P40319 345 aa2.15□□□□□ -2.07
SEC16YPL085W HXT9P40885 567 aa2.15□□□□□ -2.07
SEC16YPL085W SUM1P46676 1062 aa2.15□□□□□ -2.07
SEC16YPL085W EMC2P47133 292 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W ECL1P48235 211 aa2.15□□□□□ -2.07
SEC16YPL085W NUP42P49686 430 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W ERG25P53045 309 aa2.15□□□□□ -2.07
SEC16YPL085W ECM22Q05958 814 aaPredicted RBP2.15□□□□□ -2.07
SEC16YPL085W WTM1Q12363 437 aaKnown RBP2.15□□□□□ -2.07
SEC16YPL085W CTF3Q12748 733 aa2.15□□□□□ -2.07
SEC16YPL085W PBS2P08018 668 aa2.14□□□□□ -2.07
SEC16YPL085W KIN2P13186 1147 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W CDC23P16522 626 aa2.14□□□□□ -2.07
SEC16YPL085W KGD1P20967 1014 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W AIM17P23180 465 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W PDC6P26263 563 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W SEC65P29478 273 aa2.14□□□□□ -2.07
SEC16YPL085W DCG1P32460 244 aa2.14□□□□□ -2.07
SEC16YPL085W ISF1P32488 338 aa2.14□□□□□ -2.07
SEC16YPL085W MRPL3P36516 390 aa2.14□□□□□ -2.07
SEC16YPL085W YRO2P38079 344 aa2.14□□□□□ -2.07
SEC16YPL085W LSM5P40089 93 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W UBP7P40453 1071 aa2.14□□□□□ -2.07
SEC16YPL085W ICE2P40499 491 aa2.14□□□□□ -2.07
SEC16YPL085W MMM1P41800 426 aa2.14□□□□□ -2.07
SEC16YPL085W YGR201CP42936 225 aa2.14□□□□□ -2.07
SEC16YPL085W SFH5P47008 294 aa2.14□□□□□ -2.07
SEC16YPL085W COX16P47081 118 aa2.14□□□□□ -2.07
SEC16YPL085W ECM27P47144 725 aa2.14□□□□□ -2.07
SEC16YPL085W SCY1P53009 804 aa2.14□□□□□ -2.07
SEC16YPL085W ARO8P53090 500 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W COQ6P53318 479 aa2.14□□□□□ -2.07
SEC16YPL085W DIG2Q03373 323 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W YML108WQ03759 105 aa2.14□□□□□ -2.07
SEC16YPL085W SIZ1Q04195 904 aa2.14□□□□□ -2.07
SEC16YPL085W CHS1P08004 1131 aa2.14□□□□□ -2.07
SEC16YPL085W NCP1P16603 691 aaKnown RBP2.14□□□□□ -2.07
SEC16YPL085W DIT1P21623 536 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms