RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTA6	YPL074W	APE2	P32454	952 aa	Known RBP	4.74	□□□□□ -1.65
YTA6	YPL074W	NGG1	P32494	702 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	SPR1	P32603	445 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	ECT1	P33412	323 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	SHG1	P38337	142 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	PCM1	P38628	557 aa	Known RBP	4.74	□□□□□ -1.65
YTA6	YPL074W	BIG1	P38813	335 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	ATM1	P40416	690 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	YIL166C	P40445	542 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	THI6	P41835	540 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	ARC1	P46672	376 aa	Known RBP	4.74	□□□□□ -1.65
YTA6	YPL074W	VOA1	P53262	265 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	BIO4	P53630	237 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	INN1	P53901	409 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	RLI1	Q03195	608 aa	Known RBP	4.74	□□□□□ -1.65
YTA6	YPL074W	PRP42	Q03776	544 aa	Known RBP	4.74	□□□□□ -1.65
YTA6	YPL074W	DCR2	Q05924	578 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	IMA2	Q08295	589 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	SLD7	Q08457	257 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	TRE2	Q08693	809 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	HFI1	Q12060	488 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	RTK1	Q12100	620 aa	Predicted RBP	4.74	□□□□□ -1.65
YTA6	YPL074W	MED1	Q12321	566 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	HRT3	Q12347	344 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	MED11	Q99278	115 aa		4.74	□□□□□ -1.65
YTA6	YPL074W	TPK3	P05986	398 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	GCR1	P07261	785 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	RPL8A	P17076	256 aa	Known RBP	4.73	□□□□□ -1.65
YTA6	YPL074W	RNA14	P25298	677 aa	Known RBP	4.73	□□□□□ -1.65
YTA6	YPL074W	HCM1	P25364	564 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	RPL8B	P29453	256 aa	Known RBP	4.73	□□□□□ -1.65
YTA6	YPL074W	GPX2	P38143	162 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	IST2	P38250	946 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	LAG1	P38703	411 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	MNL1	P38888	796 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	ERV46	P39727	415 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	PAC1	P39946	494 aa	Known RBP	4.73	□□□□□ -1.65
YTA6	YPL074W	YEL025C	P39991	1188 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	QDR1	P40475	563 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	SAD1	P43589	448 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	CCC1	P47818	322 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	SNN1	P48232	102 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	CPR8	P53728	308 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
YTA6	YPL074W	PEX25	Q02969	394 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	MRPS17	Q03246	237 aa	Predicted RBP	4.73	□□□□□ -1.65
YTA6	YPL074W	HED1	Q03937	162 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	NHX1	Q04121	633 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	CAB1	Q04430	367 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	ISR1	Q06098	443 aa	Known RBP	4.73	□□□□□ -1.65
YTA6	YPL074W	YDL129W	Q07555	291 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	ATX2	Q12067	313 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	VAM3	Q12241	283 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	SPE4	Q12455	300 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	NBL1	Q3E7Y6	73 aa		4.73	□□□□□ -1.65
YTA6	YPL074W	HTB1	P02293	131 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	HTB2	P02294	131 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	ATP1	P07251	545 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	YPK1	P12688	680 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	MIP1	P15801	1254 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	RRP7	P25368	297 aa	Predicted RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	CDC20	P26309	610 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	CAP1	P28495	268 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	GCD11	P32481	527 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	ISC10	P32645	267 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	GSP1	P32835	219 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	GSP2	P32836	220 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	SNU114	P36048	1008 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	NCL1	P38205	684 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	YEL020C	P39994	560 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	FMP52	P40008	231 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	MMF1	P40185	145 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	CHS6	P40955	746 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	SNG1	P46950	547 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	MRX5	P47007	382 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	SWC4	P53201	476 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	SOK2	P53438	785 aa	Predicted RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	SEN15	Q04675	128 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	ADY4	Q05955	493 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	YPR078C	Q06813	372 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	AAD15	Q08361	143 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	YPL272C	Q08984	517 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	ECM3	Q99252	613 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	INH1	P01097	85 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	AAC1	P04710	309 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	RPL4A	P10664	362 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	FBA1	P14540	359 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	RFA1	P22336	621 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	UBC8	P28263	218 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	HMX1	P32339	317 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	DAL1	P32375	460 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	MUD1	P32605	298 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	RPT3	P33298	428 aa	Known RBP	4.72	□□□□□ -1.65
YTA6	YPL074W	MDL2	P33311	773 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	CTF13	P35203	478 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	PHO11	P35842	467 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	POA1	P38218	177 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	YBR259W	P38338	688 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	MMS21	P38632	267 aa		4.72	□□□□□ -1.65
YTA6	YPL074W	PHO12	P38693	467 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 96 ms