RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W PHO92Q06390 306 aa3.7□□□□□ -1.82
HSH49YOR319W GSH2Q08220 491 aa3.7□□□□□ -1.82
HSH49YOR319W REX3Q12090 404 aa3.7□□□□□ -1.82
HSH49YOR319W YDR061WQ12298 539 aa3.7□□□□□ -1.82
HSH49YOR319W ADE4P04046 510 aaKnown RBP3.69□□□□□ -1.82
HSH49YOR319W ARO3P14843 370 aaKnown RBP3.69□□□□□ -1.82
HSH49YOR319W DAP2P18962 818 aa3.69□□□□□ -1.82
HSH49YOR319W RIM1P32445 135 aaKnown RBP3.69□□□□□ -1.82
HSH49YOR319W RAD24P32641 659 aa3.69□□□□□ -1.82
HSH49YOR319W PDR3P33200 976 aa3.69□□□□□ -1.82
HSH49YOR319W PFF1P38244 976 aa3.69□□□□□ -1.82
HSH49YOR319W PES4P39684 611 aa3.69□□□□□ -1.82
HSH49YOR319W PCL6P40038 420 aa3.69□□□□□ -1.82
HSH49YOR319W CSM2P40465 213 aa3.69□□□□□ -1.82
HSH49YOR319W YIR016WP40572 265 aa3.69□□□□□ -1.82
HSH49YOR319W SAS2P40963 338 aa3.69□□□□□ -1.82
HSH49YOR319W MDV1P47025 714 aa3.69□□□□□ -1.82
HSH49YOR319W MDE1P47095 244 aa3.69□□□□□ -1.82
HSH49YOR319W YGL082WP53155 381 aa3.69□□□□□ -1.82
HSH49YOR319W PDR16P53860 351 aaKnown RBP3.69□□□□□ -1.82
HSH49YOR319W RPL15BP54780 204 aaPredicted RBP3.69□□□□□ -1.82
HSH49YOR319W SLD5Q03406 294 aa3.69□□□□□ -1.82
HSH49YOR319W NUP53Q03790 475 aa3.69□□□□□ -1.82
HSH49YOR319W MSS11Q03825 758 aa3.69□□□□□ -1.82
HSH49YOR319W MGR3Q04472 501 aa3.69□□□□□ -1.82
HSH49YOR319W THI20Q08224 551 aa3.69□□□□□ -1.82
HSH49YOR319W LSP1Q12230 341 aaKnown RBP3.69□□□□□ -1.82
HSH49YOR319W PSY3Q12318 242 aa3.69□□□□□ -1.82
HSH49YOR319W NBL1Q3E7Y6 73 aa3.69□□□□□ -1.82
HSH49YOR319W HIS4P00815 799 aaKnown RBP3.68□□□□□ -1.82
HSH49YOR319W EXO70P19658 623 aa3.68□□□□□ -1.82
HSH49YOR319W AIM17P23180 465 aaKnown RBP3.68□□□□□ -1.82
HSH49YOR319W YCP4P25349 247 aaKnown RBP3.68□□□□□ -1.82
HSH49YOR319W PPZ1P26570 692 aa3.68□□□□□ -1.82
HSH49YOR319W HSP104P31539 908 aaKnown RBP3.68□□□□□ -1.82
HSH49YOR319W VPS17P32913 551 aa3.68□□□□□ -1.82
HSH49YOR319W ECM15P35195 104 aa3.68□□□□□ -1.82
HSH49YOR319W SOR1P35497 357 aaKnown RBP3.68□□□□□ -1.82
HSH49YOR319W MIC60P36112 540 aa3.68□□□□□ -1.82
HSH49YOR319W PCA1P38360 1216 aa3.68□□□□□ -1.82
HSH49YOR319W STN1P38960 494 aa3.68□□□□□ -1.82
HSH49YOR319W NAS2P40555 220 aa3.68□□□□□ -1.82
HSH49YOR319W SCD6P45978 349 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
HSH49YOR319W SAM50P53969 484 aa3.68□□□□□ -1.82
HSH49YOR319W TAF12Q03761 539 aa3.68□□□□□ -1.82
HSH49YOR319W SOR2Q07786 357 aa3.68□□□□□ -1.82
HSH49YOR319W ATX2Q12067 313 aa3.68□□□□□ -1.82
HSH49YOR319W BUG1Q12191 341 aa3.68□□□□□ -1.82
HSH49YOR319W SRN2Q99176 213 aa3.68□□□□□ -1.82
HSH49YOR319W COX3P00420 269 aa3.67□□□□□ -1.82
HSH49YOR319W HNM1P19807 563 aa3.67□□□□□ -1.82
HSH49YOR319W RPI1P23250 407 aaKnown RBP3.67□□□□□ -1.82
HSH49YOR319W FAA1P30624 700 aaKnown RBP3.67□□□□□ -1.82
HSH49YOR319W APE2P32454 952 aaKnown RBP3.67□□□□□ -1.82
HSH49YOR319W ECM25P32525 599 aa3.67□□□□□ -1.82
HSH49YOR319W ATO2P32907 282 aa3.67□□□□□ -1.82
HSH49YOR319W RRP3P38712 501 aaKnown RBP3.67□□□□□ -1.82
HSH49YOR319W OSH3P38713 996 aaKnown RBP3.67□□□□□ -1.82
HSH49YOR319W PHO86P46956 311 aa3.67□□□□□ -1.82
HSH49YOR319W GPI8P49018 411 aa3.67□□□□□ -1.82
HSH49YOR319W BET4Q00618 327 aa3.67□□□□□ -1.82
HSH49YOR319W YDR387CQ04162 555 aa3.67□□□□□ -1.82
HSH49YOR319W BNA5Q05979 453 aa3.67□□□□□ -1.82
HSH49YOR319W SNA4Q07549 140 aa3.67□□□□□ -1.82
HSH49YOR319W UBX3Q12229 455 aa3.67□□□□□ -1.82
HSH49YOR319W DAL5P15365 543 aa3.66□□□□□ -1.82
HSH49YOR319W ALG1P16661 449 aa3.66□□□□□ -1.82
HSH49YOR319W MGR1P25573 417 aa3.66□□□□□ -1.82
HSH49YOR319W BUB3P26449 341 aa3.66□□□□□ -1.82
HSH49YOR319W PHO91P27514 894 aa3.66□□□□□ -1.82
HSH49YOR319W ACH1P32316 526 aa3.66□□□□□ -1.82
HSH49YOR319W YNK1P36010 153 aaKnown RBP3.66□□□□□ -1.82
HSH49YOR319W PCF11P39081 626 aaPredicted RBP3.66□□□□□ -1.82
HSH49YOR319W GAT2P40209 560 aa3.66□□□□□ -1.82
HSH49YOR319W TRS85P46944 698 aa3.66□□□□□ -1.82
HSH49YOR319W ASN2P49090 572 aaKnown RBP3.66□□□□□ -1.82
HSH49YOR319W SHE4P51534 789 aa3.66□□□□□ -1.82
HSH49YOR319W CUE3P53137 624 aaKnown RBP3.66□□□□□ -1.82
HSH49YOR319W ESBP6P53918 673 aa3.66□□□□□ -1.82
HSH49YOR319W PML1Q07930 204 aaPredicted RBP3.66□□□□□ -1.82
HSH49YOR319W SRL1Q08673 210 aa3.66□□□□□ -1.82
HSH49YOR319W BSC1Q12140 328 aa3.66□□□□□ -1.82
HSH49YOR319W RKM5Q12367 367 aa3.66□□□□□ -1.82
HSH49YOR319W AMD1P15274 810 aaKnown RBP3.65□□□□□ -1.83
HSH49YOR319W SEC62P21825 274 aa3.65□□□□□ -1.83
HSH49YOR319W UBA1P22515 1024 aaKnown RBP3.65□□□□□ -1.83
HSH49YOR319W NDI1P32340 513 aa3.65□□□□□ -1.83
HSH49YOR319W SMY1P32364 656 aaKnown RBP3.65□□□□□ -1.83
HSH49YOR319W FRE1P32791 686 aa3.65□□□□□ -1.83
HSH49YOR319W RRF1P38771 230 aa3.65□□□□□ -1.83
HSH49YOR319W RRP4P38792 359 aaKnown RBP3.65□□□□□ -1.83
HSH49YOR319W YIL089WP40500 205 aa3.65□□□□□ -1.83
HSH49YOR319W YPS6P40583 537 aa3.65□□□□□ -1.83
HSH49YOR319W GUF1P46943 645 aa3.65□□□□□ -1.83
HSH49YOR319W RPA34P47006 233 aaPredicted RBP3.65□□□□□ -1.83
HSH49YOR319W ROG1P53118 685 aa3.65□□□□□ -1.83
HSH49YOR319W PIB2P53191 635 aa3.65□□□□□ -1.83
HSH49YOR319W YIF1P53845 314 aaKnown RBP3.65□□□□□ -1.83
HSH49YOR319W AQR1P53943 586 aa3.65□□□□□ -1.83
HSH49YOR319W GIP3Q03016 1276 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms