RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W CCT6P39079 546 aa3.41□□□□□ -1.86
VPS17YOR132W CIN4P39110 191 aa3.41□□□□□ -1.86
VPS17YOR132W IME4P41833 600 aa3.41□□□□□ -1.86
VPS17YOR132W TFG2P41896 400 aaPredicted RBP3.41□□□□□ -1.86
VPS17YOR132W SMC3P47037 1230 aa3.41□□□□□ -1.86
VPS17YOR132W CUE3P53137 624 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W YNL234WP53857 426 aa3.41□□□□□ -1.86
VPS17YOR132W ESBP6P53918 673 aa3.41□□□□□ -1.86
VPS17YOR132W BET4Q00618 327 aa3.41□□□□□ -1.86
VPS17YOR132W DIG1Q03063 452 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W MRD1Q06106 887 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W DBP9Q06218 594 aaKnown RBP3.41□□□□□ -1.86
VPS17YOR132W GPN2Q08726 347 aaPredicted RBP3.41□□□□□ -1.86
VPS17YOR132W CTF3Q12748 733 aa3.41□□□□□ -1.86
VPS17YOR132W YPT6Q99260 215 aa3.41□□□□□ -1.86
VPS17YOR132W YBR085C-AO43137 85 aa3.4□□□□□ -1.86
VPS17YOR132W RPL1AP0CX43 217 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W RPL1BP0CX44 217 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W PET123P17558 318 aa3.4□□□□□ -1.86
VPS17YOR132W PHO13P19881 312 aa3.4□□□□□ -1.86
VPS17YOR132W RPB8P20436 146 aa3.4□□□□□ -1.86
VPS17YOR132W VPS17P32913 551 aa3.4□□□□□ -1.86
VPS17YOR132W BMH2P34730 273 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W MYO3P36006 1272 aa3.4□□□□□ -1.86
VPS17YOR132W CSM2P40465 213 aa3.4□□□□□ -1.86
VPS17YOR132W PKP1P40530 394 aa3.4□□□□□ -1.86
VPS17YOR132W MKT1P40850 830 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W AGX1P43567 385 aa3.4□□□□□ -1.86
VPS17YOR132W ALT2P52892 507 aa3.4□□□□□ -1.86
VPS17YOR132W YGR066CP53242 292 aa3.4□□□□□ -1.86
VPS17YOR132W YTP1P53584 459 aa3.4□□□□□ -1.86
VPS17YOR132W PDR16P53860 351 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W CTL1Q03220 320 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W YML037CQ03703 340 aa3.4□□□□□ -1.86
VPS17YOR132W RBA50Q04418 439 aa3.4□□□□□ -1.86
VPS17YOR132W MGR3Q04472 501 aa3.4□□□□□ -1.86
VPS17YOR132W SOV1Q04748 898 aa3.4□□□□□ -1.86
VPS17YOR132W YMR254CQ04838 102 aa3.4□□□□□ -1.86
VPS17YOR132W NOP6Q07623 225 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W TCO89Q08921 799 aa3.4□□□□□ -1.86
VPS17YOR132W YPL272CQ08984 517 aa3.4□□□□□ -1.86
VPS17YOR132W RTC5Q12108 567 aaKnown RBP3.4□□□□□ -1.86
VPS17YOR132W RPL22AP05749 121 aaKnown RBP3.39□□□□□ -1.87
VPS17YOR132W SYN8P31377 255 aa3.39□□□□□ -1.87
VPS17YOR132W YET1P35723 206 aa3.39□□□□□ -1.87
VPS17YOR132W STV1P37296 890 aa3.39□□□□□ -1.87
VPS17YOR132W YPK3P38070 525 aa3.39□□□□□ -1.87
VPS17YOR132W THI2P38141 450 aa3.39□□□□□ -1.87
VPS17YOR132W YAT2P40017 923 aa3.39□□□□□ -1.87
VPS17YOR132W CAK1P43568 368 aaPredicted RBP3.39□□□□□ -1.87
VPS17YOR132W SAD1P43589 448 aa3.39□□□□□ -1.87
VPS17YOR132W DPB11P47027 764 aaPredicted RBP3.39□□□□□ -1.87
VPS17YOR132W CAF130P53280 1122 aaPredicted RBP3.39□□□□□ -1.87
VPS17YOR132W TOF2Q02208 771 aa3.39□□□□□ -1.87
VPS17YOR132W YMR178WQ03219 274 aaKnown RBP3.39□□□□□ -1.87
VPS17YOR132W VPS60Q03390 229 aa3.39□□□□□ -1.87
VPS17YOR132W RPC11Q04307 110 aaPredicted RBP3.39□□□□□ -1.87
VPS17YOR132W ATG29Q12092 213 aa3.39□□□□□ -1.87
VPS17YOR132W CFT2Q12102 859 aaPredicted RBP3.39□□□□□ -1.87
VPS17YOR132W FIG2P25653 1609 aa3.39□□□□□ -1.87
VPS17YOR132W GRR1P24814 1151 aa3.39□□□□□ -1.87
VPS17YOR132W SNT1P25357 1226 aa3.39□□□□□ -1.87
VPS17YOR132W SPC110P32380 944 aa3.39□□□□□ -1.87
VPS17YOR132W PMT1P33775 817 aa3.39□□□□□ -1.87
VPS17YOR132W SEF1P34228 1148 aa3.39□□□□□ -1.87
VPS17YOR132W RRT2P38332 387 aa3.39□□□□□ -1.87
VPS17YOR132W VPS45P38932 577 aa3.39□□□□□ -1.87
VPS17YOR132W BFR1P38934 470 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
VPS17YOR132W SEC9P40357 651 aa3.39□□□□□ -1.87
VPS17YOR132W HXT9P40885 567 aa3.39□□□□□ -1.87
VPS17YOR132W MAF1P41910 395 aa3.39□□□□□ -1.87
VPS17YOR132W APT1P49435 187 aaKnown RBP3.39□□□□□ -1.87
VPS17YOR132W RPN14P53196 417 aa3.39□□□□□ -1.87
VPS17YOR132W YGR111WP53265 400 aa3.39□□□□□ -1.87
VPS17YOR132W RRN5Q02983 363 aa3.39□□□□□ -1.87
VPS17YOR132W RRB1Q04225 511 aaKnown RBP3.39□□□□□ -1.87
VPS17YOR132W FMP42Q04991 504 aa3.39□□□□□ -1.87
VPS17YOR132W RQC1Q05468 723 aaKnown RBP3.39□□□□□ -1.87
VPS17YOR132W YKL068W-AQ3E826 78 aa3.39□□□□□ -1.87
VPS17YOR132W EST1P17214 699 aaPredicted RBP3.38□□□□□ -1.87
VPS17YOR132W BMH1P29311 267 aaKnown RBP3.38□□□□□ -1.87
VPS17YOR132W PRO3P32263 286 aaKnown RBP3.38□□□□□ -1.87
VPS17YOR132W PDR3P33200 976 aa3.38□□□□□ -1.87
VPS17YOR132W PTK1P36002 662 aaPredicted RBP3.38□□□□□ -1.87
VPS17YOR132W HSM3P38348 480 aa3.38□□□□□ -1.87
VPS17YOR132W OTU2P38747 307 aaKnown RBP3.38□□□□□ -1.87
VPS17YOR132W YDR089WP38966 869 aa3.38□□□□□ -1.87
VPS17YOR132W SEC24P40482 926 aaKnown RBP3.38□□□□□ -1.87
VPS17YOR132W IAH1P41734 238 aa3.38□□□□□ -1.87
VPS17YOR132W PET130P47065 347 aa3.38□□□□□ -1.87
VPS17YOR132W RPT4P53549 437 aaKnown RBP3.38□□□□□ -1.87
VPS17YOR132W IRC4Q03036 179 aa3.38□□□□□ -1.87
VPS17YOR132W YDR239CQ03780 787 aa3.38□□□□□ -1.87
VPS17YOR132W MYO5Q04439 1219 aaKnown RBP3.38□□□□□ -1.87
VPS17YOR132W VPS38Q05919 439 aa3.38□□□□□ -1.87
VPS17YOR132W YPR172WQ06608 200 aa3.38□□□□□ -1.87
VPS17YOR132W TLG2Q08144 397 aa3.38□□□□□ -1.87
VPS17YOR132W YOL075CQ08234 1294 aa3.38□□□□□ -1.87
VPS17YOR132W ATG9Q12142 997 aa3.38□□□□□ -1.87
VPS17YOR132W LEU9Q12166 604 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms