RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	ERG7	P38604	731 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	ELO1	P39540	310 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	SHQ1	P40486	507 aa	Predicted RBP	5.27	□□□□□ -1.57
NUP1	YOR098C	UBX6	P47049	396 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	KTR6	P54070	446 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	CAB5	Q03941	241 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	INP53	Q12271	1107 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	MED4	Q12343	284 aa		5.27	□□□□□ -1.57
NUP1	YOR098C	DDP1	Q99321	188 aa	Known RBP	5.27	□□□□□ -1.57
NUP1	YOR098C	JIP3	O13555	125 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	DAL81	P21657	970 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	MVD1	P32377	396 aa	Known RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	SRB4	P32569	687 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	BMH2	P34730	273 aa	Known RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	CUE2	P36075	443 aa	Known RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	SLX1	P38324	304 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	PCA1	P38360	1216 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	LNP1	P38878	278 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	ROG1	P53118	685 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	MRH1	Q12117	320 aa	Predicted RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	BAG7	Q12128	409 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	RPO41	P13433	1351 aa	Known RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	PUT2	P07275	575 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	BEM1	P29366	551 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	CDC5	P32562	705 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	YKR015C	P36111	568 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	YER085C	P40058	173 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	PIG2	P40187	538 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	DPB11	P47027	764 aa	Predicted RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	MPS3	P47069	682 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	ADE16	P54113	591 aa	Known RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	RRG8	Q06109	277 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	SFH1	Q06168	426 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	LEA1	Q08963	238 aa	Predicted RBP	5.26	□□□□□ -1.57
NUP1	YOR098C	RRD2	Q12461	358 aa		5.26	□□□□□ -1.57
NUP1	YOR098C	COX3	P00420	269 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	RPI1	P23250	407 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	SKN7	P38889	622 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	BAP3	P41815	604 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	SLK19	Q08581	821 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	PMR1	P13586	950 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	ALG1	P16661	449 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	CNE1	P27825	502 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	HES1	P35843	434 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	SNU114	P36048	1008 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	UIP3	P39547	235 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	OPT1	P40897	799 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	GEP3	Q08622	556 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	TRM11	Q12463	433 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	FMP16	Q12497	93 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	SPS4	P09937	338 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	FUS3	P16892	353 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	AMD2	P22580	549 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	GSY2	P27472	705 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	YMR147W	P40218	223 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	YFR020W	P43600	232 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	ASN2	P49090	572 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	EFM5	P53200	248 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	YGR117C	P53270	476 aa		5.25	□□□□□ -1.57
NUP1	YOR098C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.25	□□□□□ -1.57
NUP1	YOR098C	RPS24A	P0CX31	135 aa	Known RBP	5.24	□□□□□ -1.57
NUP1	YOR098C	RPS24B	P0CX32	135 aa	Known RBP	5.24	□□□□□ -1.57
NUP1	YOR098C	PMI40	P29952	429 aa	Known RBP	5.24	□□□□□ -1.57
NUP1	YOR098C	YHR210C	P38893	341 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
NUP1	YOR098C	ECM10	P39987	644 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	YDR541C	Q03049	344 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	SSY1	Q03770	852 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	YDR109C	Q04585	715 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	HMI1	Q12039	706 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	SPR1	P32603	445 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	GPI16	P38875	610 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	MSC1	Q03104	513 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	RSN1	Q03516	953 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	NPC2	Q12408	173 aa		5.24	□□□□□ -1.57
NUP1	YOR098C	HIS5	P07172	385 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	ELF1	P36053	145 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	RCY1	P39531	840 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	YGL108C	P53139	140 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	PLB2	Q03674	706 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	IPK1	Q06667	281 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	CYK3	Q07533	885 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	YPL216W	Q08964	1102 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
NUP1	YOR098C	STE11	P23561	717 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	GID7	P25569	745 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	GAR1	P28007	205 aa	Known RBP	5.23	□□□□□ -1.57
NUP1	YOR098C	RAD14	P28519	371 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	SIP1	P32578	815 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	PET100	P38958	111 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	CHA4	P43634	648 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	YGR127W	P53275	312 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	YNL092W	P53934	400 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	RRN11	Q04712	507 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	YPR078C	Q06813	372 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	YDL242W	Q07746	117 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	TEN1	Q07921	160 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	SRN2	Q99176	213 aa		5.23	□□□□□ -1.57
NUP1	YOR098C	UTP10	P42945	1769 aa	Known RBP	5.23	□□□□□ -1.57
NUP1	YOR098C	SPP381	P38282	291 aa	Predicted RBP	5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms