RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	SCL1	P21243	252 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	VPS34	P22543	875 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	CRM1	P30822	1084 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	RPS1A	P33442	255 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	SIP2	P34164	415 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	YKL100C	P34248	587 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	SOL2	P37262	315 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	RFC3	P38629	340 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	ARN1	P38731	627 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	PFS1	P38872	237 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	AXL2	P38928	823 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	DHH1	P39517	506 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	NPT1	P39683	429 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	YEL073C	P39974	107 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	YER034W	P40022	185 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	EMP65	P40085	556 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	BIR1	P47134	954 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	EFM5	P53200	248 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	LSM3	P57743	89 aa	Known RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	SMA1	Q02651	245 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	VHS1	Q03785	461 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	CRN1	Q06440	651 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	RRP42	Q12277	265 aa	Predicted RBP	4.09	□□□□□ -1.75
TRM11	YOL124C	ATG34	Q12292	412 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	NAG1	Q8TGN9	163 aa		4.09	□□□□□ -1.75
TRM11	YOL124C	STE3	P06783	470 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	FUM1	P08417	488 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	DBR1	P24309	405 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	DMC1	P25453	334 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	RPC19	P28000	142 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	MVD1	P32377	396 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	SFP1	P32432	683 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	RML2	P32611	393 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	NUP120	P35729	1037 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	RMA1	P36001	430 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	SRX1	P36077	127 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	TCD2	P36101	447 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	BZZ1	P38822	633 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	SEC31	P38968	1273 aa	Known RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	PCF11	P39081	626 aa	Predicted RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	MGS1	P40151	587 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	YJL070C	P40361	888 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	VHR1	P40522	640 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	GCD10	P41814	478 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	TMA22	P47089	198 aa	Predicted RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	YJR154W	P47181	346 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	HSV2	P50079	448 aa	Predicted RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	MRM2	P53123	320 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	MPS2	P53159	387 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	GTR2	P53290	341 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	CUS2	P53830	285 aa	Predicted RBP	4.08	□□□□□ -1.76
TRM11	YOL124C	ATP25	Q03153	612 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	TAF12	Q03761	539 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	ARG7	Q04728	441 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	YML053C	Q04978	212 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	ARO10	Q06408	635 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	TRM8	Q12009	286 aa		4.08	□□□□□ -1.76
TRM11	YOL124C	MDM35	O60200	86 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	CAR1	P00812	333 aa	Known RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	ARG1	P22768	420 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	CLB1	P24868	471 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	BUB2	P26448	306 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	PHO91	P27514	894 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	DEP1	P31385	405 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	SPR1	P32603	445 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	COX13	P32799	129 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	MED8	P38304	223 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	YPT35	P38815	214 aa	Known RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	ECM1	P39715	212 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	UTP18	P40362	594 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	PRM2	P40534	656 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	YJR149W	P47177	404 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	YGR015C	P53208	328 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	ASI2	P53895	289 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	YMR102C	Q03177	834 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	GRX3	Q03835	250 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	ARX1	Q03862	593 aa	Known RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	EMI1	Q04406	187 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	YMR111C	Q04461	462 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	YMR034C	Q05131	434 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	GLO2	Q05584	274 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	RIF2	Q06208	395 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	RSC3	Q06639	885 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	REH1	Q06709	432 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
TRM11	YOL124C	PST1	Q12355	444 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	RRP36	Q12481	300 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	HSH49	Q99181	213 aa	Predicted RBP	4.07	□□□□□ -1.76
TRM11	YOL124C	YOL087C	Q99247	1116 aa		4.07	□□□□□ -1.76
TRM11	YOL124C	COX3	P00420	269 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	CDC21	P06785	304 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	PMR1	P13586	950 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	GUK1	P15454	187 aa	Known RBP	4.06	□□□□□ -1.76
TRM11	YOL124C	PRP4	P20053	465 aa	Known RBP	4.06	□□□□□ -1.76
TRM11	YOL124C	OCA4	P25366	362 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	YCL002C	P25565	263 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	ATP11	P32453	318 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	TOA1	P32773	286 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	TFB1	P32776	642 aa		4.06	□□□□□ -1.76
TRM11	YOL124C	FRE2	P36033	711 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms